Job Description P77806 Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012 Rank 90 Aligned Residues 334 % Identity 13% Template c3nnkC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway Resolution 2.58 Å

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		31	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		Q	A	I	N	L	S	Q	G	F	P	D	.	.	.	.	.	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																											.																				.	.
Template Conservation																																												.																				.	.
Template Sequence		D	I	T	Q	F	S	Q	L	N	P	P	S	R	L	L	M	G	P	G	P	I	N	A	D	P	R	V	L	R	A	M	S	S	Q	L	I	G	Q	Y	D	P	A	.	M	T	H	Y	M	N	E	V	M	A	L	Y	R	G	V	F	R	T	E	.	.	N	R	W	T	M	L	V	D	G	T	S	R	A	G	I	E
Template Known Secondary structure				T	T	S		S										S	S	S													T	S					T	T				.																	T			.	.		S						S	S
Template Predicted Secondary structure																																												.																				.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																										.																	.
Query SS confidence																																										.																	.
Query Sequence		A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	.	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	.	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A
Query Conservation																																										.																	.
Alig confidence																																										.																	.
Template Conservation
Template Sequence		A	I	L	V	S	A	I	R	P	G	D	K	V	L	V	P	V	F	G	R	F	G	H	L	L	C	E	I	A	R	R	C	R	A	E	V	H	T	I	E	V	P	W	G	E	V	F	T	P	D	Q	V	E	D	A	V	K	R	I	R	P	R	L	L	L	T	V	Q	G	D	T	S	T	T	M	L	Q	P	L	A
Template Known Secondary structure										T										S													T	T										T	T																		S						S			T	T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.																							.	.	.	.	.	.	.	.																											.	.																		.	.
Template Conservation		.	.	.																							.	.	.	.	.	.	.	.																											.	.
Template Sequence		.	.	.	E	L	G	E	I	C	R	R	Y	D	A	L	F	Y	T	D	A	T	A	S	L	G	.	.	.	.	.	.	.	.	G	N	P	L	E	T	D	V	W	G	L	D	A	V	S	A	G	M	Q	C	L	G	G	P	S	G	.	.	T	S	P	I	T	L	S	A	R	M	E	E	A	I	R	R	R	K	C
Template Known Secondary structure		.	.	.	T								T	T								T	T	T	B	T	.	.	.	.	.	.	.	.	T	B				T	T	T	T	T		S													S	S	.	.																T	T
Template Predicted Secondary structure		.	.	.																							.	.	.	.	.	.	.	.																											.	.
Template SS confidence
					159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
																																				262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	.	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation
Template Sequence		V	E	E	G	I	R	T	D	A	H	R	D	G	D	E	E	M	I	Y	S	N	Y	F	D	L	G	M	V	M	D	Y	W	G	P	E	R	L	N	H	H	T	E	A	T	T	A	L	F	G	A	R	E	C	A	R	L	I	L	Q	E	G	L	D	Y	G	I	A	R	H	K	L	H	G	D	A	L	V	K	G	I
Template Known Secondary structure				T	T	S			T	T					S	S				S		S	T	T										S	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																	.	.	.																																																.	.	.
Query SS confidence																	.	.	.																																																.	.	.
Query Sequence		N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	.	.	.	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	.	.	.	F	A	K	K	E	S	T	L	L	A	A	A
Query Conservation																	.	.	.																																																.	.	.
Alig confidence																	.	.	.								.	.																										.	.	.	.										.	.	.
Template Conservation																											.	.																										.	.	.	.
Template Sequence		Q	A	M	G	L	E	T	F	G	D	L	K	H	K	M	N	N	V	L	G	V	V	I	P	Q	.	.	G	I	N	G	D	Q	A	R	K	L	M	L	E	D	F	G	I	E	I	G	T	S	F	G	P	.	.	.	.	L	H	G	K	V	W	R	I	G	T	M	G	Y	N	A	R	K	D	C	V	M	T	T	L
Template Known Secondary structure				T	T			B		S		G	G	G	B		T	T								S	.	.	S	S																		B				G	G	.	.	.	.	G	T	T	T								G	G	G		S
Template Predicted Secondary structure																											.	.																										.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		381	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	L	E	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions