Job Description P77806 Confidence 99.87% Date Thu Jan 5 12:33:00 GMT 2012 Rank 196 Aligned Residues 315 % Identity 13% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	.	.	.	.	.	.	.	.	.	.	.	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																													.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation									.	.																																																				.	.	.	.	.	.
Template Sequence		K	I	N	F	S	A	G	.	.	P	S	T	L	P	L	E	I	L	E	Q	A	Q	K	E	L	C	D	Y	Q	G	R	G	Y	S	I	X	E	I	S	H	R	T	K	V	F	E	E	V	H	F	G	A	Q	E	K	A	K	K	L	Y	.	.	.	.	.	.	E	L	N	D	D	Y	E	V	L	F	L	Q	G	G
Template Known Secondary structure							S	S	.	.	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		S	S	S																			.	.	.	.	.	.	T			T	T							S	S
Template Predicted Secondary structure									.	.																																																				.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	.	.	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T
Query Conservation																													.	.
Alig confidence																													.	.																												.	.
Template Conservation																																																										.	.
Template Sequence		A	S	L	Q	F	A	X	I	P	X	N	L	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	E	S	N	F	D	H	I	P	.	.	R	V	E	F	S	D	N	A	D	Y	A	Y	I	C	S	N	N	T	I	Y	G	T
Template Known Secondary structure																S	S								S													T	T										T	T	T	T	S		S			.	.						T	T	S	S						S			T	T	T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation							.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		Q	Y	Q	N	Y	.	.	.	.	.	.	.	.	.	P	K	T	K	T	P	L	I	V	D	A	S	S	D	F	F	S	R	.	.	.	.	.	.	.	.	.	.	K	V	D	F	S	N	I	A	L	F	Y	G	G	V	Q	K	N	A	G	I	S	G	.	.	L	S	C	I	F	I	R	K	D	X	L	E	R	S
Template Known Secondary structure				S	S		.	.	.	.	.	.	.	.	.				S	S							G	G	G	T	T	S	S	.	.	.	.	.	.	.	.	.	.					T	T								T	T	T	T	S	S		T	T	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		153	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.											.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.
		259														260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.					.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	.	.	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	.	R	L	E	I	L	P	C	E	.	.	.	.	G
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Template Conservation
Template Sequence		K	N	K	Q	I	P	S	X	L	N	Y	L	T	H	A	E	N	Q	S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	C	I	D	L	S	N	G	F	Y	K	G	H	A	D	K	K	D	R	S
Template Known Secondary structure			T					G	G	G								T	T	T		S	S																			T	T	T																						T	S	T	T	S				S	S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	.	.	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation																																																						.	.
Alig confidence												.	.																								.	.	.	.	.	.												.	.
Template Conservation												.	.																								.	.	.	.	.	.
Template Sequence		L	X	N	V	S	F	N	I	A	K	.	.	N	K	D	L	E	P	L	F	V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	.	.	.	.	.	.	R	I	L	G	G	I	R	A	S	I	Y	N	A	L	N	L	D	Q	V	K	T	L	C	E	F	X	K	E
Template Known Secondary structure		S	S							S	S	.	.		T	T												T	T					B			.	.	.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure												.	.																								.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.							.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions