Job Description P77806 Confidence 99.96% Date Thu Jan 5 12:33:00 GMT 2012 Rank 114 Aligned Residues 336 % Identity 15% Template c3i4jC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans Resolution 1.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure														.	.						.
Query SS confidence														.	.						.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	S	Q	G	.	.	F	P	D	F	D	.	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A
Query Conservation														.	.						.
Alig confidence														.	.						.																.																															.	.	.
Template Conservation																																					.																															.	.	.
Template Sequence		D	A	G	R	R	Y	L	D	G	S	S	G	A	L	V	A	N	I	G	H	G	R	A	E	V	G	E	R	M	A	A	Q	A	A	R	.	L	P	F	V	H	G	S	Q	F	S	S	D	V	L	E	E	Y	A	G	R	L	A	R	F	V	G	L	P	T	F	.	.	.	R	F	W	A	V	S	G	G	S	E	A
Template Known Secondary structure		T	T							T	T					T		T	T		B																.						T	T	T																	T	T		T	T		.	.	.						S	S
Template Predicted Secondary structure																																					.																															.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.
		104	.	.	.	.	.									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Query Sequence		L	Y	A	A	I	T	.	.	.	.	.	.	.	.	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	.	.	.	.	.	.	L	V	I	L
Query Conservation								.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	S	A	V	K	L	A	R	Q	Y	H	V	E	R	G	E	P	G	R	F	K	V	I	T	R	V	P	S	R	E	L	Y	T	P	L	M	R	P	E	A	W	P	K	L	P	K	P	D	P	A	R	N	G	A	E	D	A	E	G	L	R	A	L	L	E	R	E	G	P	E	T	V	A	A	F	M	A	E	P
Template Known Secondary structure																T	T		T	T								T	T			T	T	T	G	G	G	G	S	G	G	G									T	T	S							T											G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V
Query Conservation
Alig confidence																																																													.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		V	V	G	A	S	D	A	A	L	A	P	A	P	G	Y	Y	E	R	V	R	D	I	C	D	E	A	G	I	I	F	I	A	D	E	V	M	S	G	M	G	R	C	G	S	P	L	A	L	S	R	W	S	G	V	T	P	D	I	A	.	.	.	.	V	L	G	K	G	L	A	A	G	Y	A	P	L	A	G	L	L
Template Known Secondary structure		S			G	G	G	T	T					T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	T				S			.	.	.	.				G	G	G	T	T	T	S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	.	.	.	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		A	A	P	Q	V	Y	E	T	V	M	G	G	F	M	H	G	F	T	Y	A	G	H	P	V	S	V	A	A	G	L	S	V	L	D	I	V	E	R	E	D	L	T	G	A	A	K	E	R	G	A	Q	L	L	A	G	L	Q	A	L	Q	A	R	F	P	Q	M	M	Q	V	R	G	T	G	L	L	L	G	V	V	L
Template Known Secondary structure																			T	T	T	T																		T	T																								T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	.	.	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																																												.	.
Alig confidence				.	.	.														.							.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation				.	.	.														.							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	.	.	.	L	I	A	S	R	I	G	A	A	A	L	K	R	.	G	L	I	T	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	H	L	L	L	G	P	P	L	S	I	T	A	A	E	V	D	G	L	L	A	L	L	A	G	A
Template Known Secondary structure				.	.	.														.	T	B					.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure				.	.	.														.							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		358	.				360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.													.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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