Job Description P77806 Confidence 99.80% Date Thu Jan 5 12:33:00 GMT 2012 Rank 221 Aligned Residues 345 % Identity 11% Template c3fcrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aminotransferase (yp_614685.1) from2 silicibacter sp. tm1040 at 1.80 a resolution Resolution 1.80 Å

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		27	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure														.	.							.
Query SS confidence														.	.							.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	S	Q	G	.	.	F	P	D	F	D	G	.	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A
Query Conservation														.	.							.
Alig confidence														.	.							.																																														.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		R	D	G	T	K	L	L	D	A	F	A	G	L	Y	C	V	N	V	G	Y	G	R	Q	E	I	A	E	A	I	A	D	Q	A	R	E	L	A	Y	Y	H	S	Y	V	G	H	G	T	E	A	S	I	T	L	A	K	X	I	L	D	R	A	P	K	N	X	S	.	.	.	K	V	Y	F	G	L	G	G	S	D	A
Template Known Secondary structure		T	T							T	T					T			S		B																	S						T	T																	S		T	T			.	.	.						S	S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.
		104	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	A	A	I	T	A	L	V	R	.	.	.	.	.	.	.	.	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	T	N	V	K	L	I	W	Y	Y	N	N	I	L	G	R	P	E	K	K	K	I	I	S	R	W	R	G	Y	H	G	S	G	L	V	T	G	S	L	T	G	L	E	L	F	H	K	K	F	D	L	P	V	E	Q	V	I	H	T	E	A	P	Y	Y	F	R	R	E	D	L	N	Q	T	E	E	Q	F	V	A
Template Known Secondary structure																T	T		T	T								T	T					S	S							S			G	G	G	T	T	T	T	T		S		T	T							S		G	G	G		S		T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
						152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																											.	.
Query SS confidence		.	.	.	.																											.	.
Query Sequence		.	.	.	.	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	.	.	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R
Query Conservation		.	.	.	.																											.	.
Alig confidence		.	.	.	.																											.	.																																.
Template Conservation																																																																	.
Template Sequence		H	C	V	A	E	L	E	A	L	I	E	R	E	G	A	D	T	I	A	A	F	I	G	E	P	I	L	G	T	G	G	I	V	P	P	P	A	G	Y	W	E	A	I	Q	T	V	L	N	K	H	D	I	L	L	V	A	D	E	V	V	T	G	F	.	G	R	L	G	T	X	F	G	S	D	H	Y	G	L	E	P
Template Known Secondary structure																G	G	G								S	S	B	S	T	T	T		B				T	T													T								T	T	T	S	S	.	S	T	T	S	S	S							T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.																					.	.
Query SS confidence																																								.	.	.	.	.	.	.																					.	.
Query Sequence		E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	.	.	.	.	.	.	.	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	.	.	E	P	E	H	Y	L	A	L	P	D	F	Y	R
Query Conservation																																								.	.	.	.	.	.	.																					.	.
Alig confidence					.	.	.	.																																.	.	.	.	.	.	.																					.	.
Template Conservation					.	.	.	.
Template Sequence		D	I	I	.	.	.	.	T	I	A	K	G	L	T	S	A	Y	A	P	L	S	G	S	I	V	S	D	K	V	W	K	V	L	E	Q	G	T	D	E	N	G	P	I	G	H	G	W	T	Y	S	A	H	P	I	G	A	A	A	G	V	A	N	L	K	L	L	D	E	L	N	L	V	S	N	A	G	E	V	G	A
Template Known Secondary structure		S			.	.	.	.				G	G	G	T	T	T	S	S																								S		S				T	T	T	T																		T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		282	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.									330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	.	.	.	.	.	.	.	.	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		Y	L	N	A	T	X	A	E	A	L	S	Q	H	A	N	V	G	D	V	R	G	E	G	L	L	C	A	V	E	F	V	K	D	R	D	S	R	T	F	F	D	A	A	D	K	I	G	P	Q	I	S	A	K	L	L	E	Q	D	K	I	I	A	R	A	.	.	.	.	.	.	X	P	Q	G	D	I	L	G	F	A
Template Known Secondary structure												T	T	S	T	T							S	S	S								S	B	T	T	T	T	B				G	G	G																					.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.							.	.	.	.	.	.	.	.	430	.
				369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	P	F	C	L	T	R	A	E	A	D	Q	V	V	E	G	T	L	R
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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