Job Description P77806 Confidence 99.92% Date Thu Jan 5 12:33:00 GMT 2012 Rank 164 Aligned Residues 343 % Identity 16% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		N	N	P	L	I	P	Q	S	K	L	P	Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	.	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E
Query Conservation																													.
Alig confidence						.																							.												.	.																	.	.	.				.	.
Template Conservation						.																																			.	.																	.	.	.				.	.
Template Sequence		A	N	P	F	.	F	S	Q	S	L	A	E	R	D	A	S	V	R	G	A	I	L	K	E	L	E	R	Q	Q	S	Q	V	E	L	I	A	S	E	N	.	.	I	V	S	R	A	V	L	D	A	Q	G	S	V	L	T	N	.	.	.	K	Y	A	.	.	E	G	Y	D	E	V	E	A	L	A	I	E	R	V	K
Template Known Secondary structure			S			.																										S					T	T			.	.											T	S	G	G	G	S	.	.	.	S		T	.	.	T
Template Predicted Secondary structure						.																																			.	.																	.	.	.				.	.
Template SS confidence
		4	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S
Query Conservation
Alig confidence							.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	F	N	A	.	.	.	.	G	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q
Template Known Secondary structure				T	T		.	.	.	.	S							S	S															T	T											.	.	.	.	.	.	.	.	.	.	.	.	.						B		T	T	T		S	B
Template Predicted Secondary structure							.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T
Query Conservation
Alig confidence															.							.	.	.																																								.	.	.	.	.											.	.
Template Conservation															.							.	.	.																																								.	.	.	.	.											.	.
Template Sequence		Q	H	K	P	S	L	I	I	A	G	F	S	A	.	Y	P	R	K	L	D	.	.	.	F	A	R	F	R	A	I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	H	A	H	.	.	.	.	.	V	V	T	S	T	T	H	K	T	L	.	.	R
Template Known Secondary structure						S							S		.		S	S				.	.	.											T	T								T	T	T						T	T	S	S			G	G	G	T		S	.	.	.	.	.						S	S	G	G	G	.	.
Template Predicted Secondary structure															.							.	.	.																																								.	.	.	.	.											.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.			.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	.	G	T	Y
Query Conservation																																																																														.
Alig confidence																						.	.	.																																																						.
Template Conservation																						.	.	.
Template Sequence		G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	.	.	.	A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	D	N	H
Template Known Secondary structure		S		S							S											.	.	.																				T	S																								T	T				G	G	G	S		S	S	S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																						.	.														.	.	.	.	.	.
Query SS confidence																																						.	.														.	.	.	.	.	.
Query Sequence		F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	.	.	A	D	P	F	P	H	K	L	I	R	L	C	F	.	.	.	.	.	.	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																																						.	.														.	.	.	.	.	.
Alig confidence										.													.															.	.														.	.	.	.	.	.
Template Conservation										.													.
Template Sequence		L	L	L	V	D	L	R	P	.	K	G	L	K	G	A	Q	V	E	Q	A	L	.	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V
Template Known Secondary structure								G	G	.	G	T											.			T	T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure										.													.
Template SS confidence
		321	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions