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Job DescriptionP77806
Confidence100.00%DateThu Jan 5 12:33:00 GMT 2012
Rank47Aligned Residues367
% Identity19%Templatec3cbfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30........ .40.........50........ .60.........70.........80...
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Query Sequence  QSKLPQLGTTIFTQMSALAQQHQAINLSQG. . FPDFDGPRYLQERLAHHVAQ. . . GANQYAPMTGVQALREAIAQKTERL
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Template Sequence  GKGAGRIQASTIRELLKLTQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI. . .
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TSTT
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   11........20.........30.........40.........50.........60.........70.........80.......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  YGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSER
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Template Sequence  . . . GVRPE. EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERP
Template Known Secondary structure  ...TS
GG.GSS

TT
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   88.90.. .......100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220...... ...230.........240.
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Query Sequence  TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE. . RAVAVSSFGKTYHMT
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Template Sequence  RFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS. P
Template Known Secondary structure  S


BS
TTT

B

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B
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T


STTTT
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   164.....170.........180.........190.........200.........210.........220.........230.........240. .
 
   242.......250.........260.........270.........280... ......290.........300........ .310.......
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Query Sequence  GWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRA. EPEHYLALPDFYRQKRDILVNALNE. . . SRLEILPCE
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Template Sequence  GLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPK
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SS

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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   318.320.........330.........340.........350.........360.........370. ........380......
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Query Sequence  GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK. KESTLLAAAERLRQL
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Template Sequence  GGMFVWMELPK. . GLSAEGLFRRA. LEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRA
Template Known Secondary structure  BSS

T..T

.TTSGGG
TTS

TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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