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Job DescriptionP77806
Confidence99.96%DateThu Jan 5 12:33:00 GMT 2012
Rank129Aligned Residues344
% Identity15%Templatec3bcxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- PDBTitle: e1 dehydrase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40..... ....50.........60.........70.........80.........90.....
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Query Sequence  IFTQMSALAQQHQAINLSQGFPDFDGP. . . RYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDIT
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Template Sequence  LVAQYAETAMAPKPFEAGKSVVPPSGKVIGTKELQLMVEASLDG. . WLTTGRFNDAFEKKLGEYLGVP. . . . . . . . . YVL
Template Known Secondary structure  T





TTTS
B
S





T..

BS
T
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   13......20.........30.........40.........50...... ...60.........70........ .80.
 
   96...100.........110. ........120.........130.........140.........150.........160......
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Query Sequence  VTAGATEALYAAITAL. . . . . . . . . VRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRL
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Template Sequence  TTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKA
Template Known Secondary structure  S
TT
GGGGGGS

TT
SSS
TT

B
TTT
SB
GGG

SS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  VILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVG
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Template Sequence  IM. . . IAHTLGNLFD. . . LAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFG. . . . . DIGTVSFYPAHHIT. MGEGGA
Template Known Secondary structure  ...
GGG



...T

TT
TT
TTTTSSS.....S
STTSSS
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SS
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   162. ......170... ......180.........190.........200......... 210.........220... ......
 
   247..250.........260... ......270.........280.........290.........300......
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Query Sequence  YCVAPAPISAEIRKVHQ. . . . . . . . . . . . . . . . . . . . YLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNAL
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Template Conservation         
      
   
                                

     
                
   
Template Sequence  VFTQSAELKSIIESFRDWGRDCYCLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDAL
Template Known Secondary structure  S
BTTB








TT

GGG
B
S


B


BG
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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   307. .310....... ..320.........330.........340.........350.........360.
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Query Sequence  NE. SRLEILPCE. . . . . . GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFP. . . . . . . . . . . . . . . . . .
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Template Sequence  QSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFL. DEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDR
Template Known Secondary structure  GGGTTT




TT


SS
GGGSS
.TTB

B

TTSSGGGSGGGTT



S

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   325....330.........340.........350.........360...... ...370.........380.........390.........400...
 
   362.......370. ........380......
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Query Sequence  . . HKLIRLCFAK. . KESTLLAAAERLRQL
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Template Sequence  IMNQTFWIGIYPGLTHDHLDYVVSKFEEF
Template Known Secondary structure 

STT

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   404.....410.........420.........430..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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