Job Description P77806 Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012 Rank 65 Aligned Residues 341 % Identity 22% Template c2zy3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-aspartate beta-decarboxylase; PDBTitle: dodecameric l-aspartate beta-decarboxylase Resolution 2.50 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	.	.	.	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A
Query Conservation																																																				.	.	.
Alig confidence																											.	.																								.	.	.									.
Template Conservation																											.	.																																			.
Template Sequence		S	Y	V	R	D	Q	L	G	L	D	P	A	A	F	L	H	E	M	V	D	G	I	L	G	C	.	.	N	Y	P	V	P	P	R	M	L	N	I	S	E	K	I	V	R	Q	Y	I	I	R	E	M	G	A	D	A	I	P	S	E	S	V	.	N	L	F	A	V	E	G	G	T	A	A	M	A	Y	I	F	E	S
Template Known Secondary structure							T	S																	T		.	.	S			S	S	T	T																	T	T		T	T	S		G	G	G		.						S
Template Predicted Secondary structure																											.	.																																			.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		111						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure			.	.	.	.	.																					.	.																		.
Query SS confidence			.	.	.	.	.																					.	.																		.
Query Sequence		L	.	.	.	.	.	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	.	.	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	.	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q
Query Conservation			.	.	.	.	.																					.	.																		.
Alig confidence			.	.	.	.	.																					.	.																		.
Template Conservation
Template Sequence		L	K	L	N	G	L	L	K	A	G	D	K	V	A	I	G	M	P	V	F	T	P	Y	I	E	I	P	E	L	A	Q	Y	A	L	E	E	V	A	I	N	A	D	P	S	L	N	W	Q	Y	P	D	S	E	L	D	K	L	K	D	P	A	I	K	I	F	F	C	V	N	P	S	N	P	P	S	V	K	M	D	Q
Template Known Secondary structure					T	T	S	S		T	T								S			T					S	T	T	S	T	T	T										B	G	G	G	T	S	B							G	G	G	G		T	T								S	S		S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure															.	.																																																									.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																																																									.	.	.	.	.	.	.	.	.
Query Sequence		A	D	F	A	A	L	W	Q	A	I	A	G	H	.	.	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	.	.	.	.	.	.	.	.	.
Query Conservation															.	.																																																									.	.	.	.	.	.	.	.	.
Alig confidence															.	.																							.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		R	S	L	E	R	V	R	N	I	V	A	E	H	R	P	D	L	M	I	L	T	D	D	V	Y	G	T	F	A	D	D	F	Q	S	L	F	A	.	.	.	.	.	I	C	P	E	N	T	L	L	V	Y	S	F	S	K	Y	F	G	A	T	G	W	R	L	G	V	V	A	A	H	Q	Q	N	V	F	D	L	A	L
Template Known Secondary structure														T		T	T								T	T	G	G	G	S	S	S							.	.	.	.	.			G	G	G							S	T	T	T	T	T		G	G	G									S	S
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
																														252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	.	.	.	.	.	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		D	K	L	Q	E	S	E	K	V	A	L	D	H	R	Y	R	S	L	L	P	D	V	R	S	L	K	F	I	D	R	L	V	A	D	S	R	A	V	A	L	N	H	T	A	G	L	S	T	P	Q	Q	V	Q	M	A	L	F	S	L	F	A	L	M	D	E	A	D	E	Y	K	H	T	L	K	Q	L	I	R	R	R
Template Known Secondary structure			S	S												T	T	T	T		S		G	G	G											T	T	T	T	T	T	G	G	G		S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330															.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation															.																																																													.	.	.
Template Sequence		E	T	T	L	Y	R	E	L	G	M	P	P	L	.	R	D	E	N	A	V	D	Y	Y	T	L	I	D	L	Q	D	V	T	A	K	L	Y	G	E	A	F	S	E	W	A	V	K	Q	S	S	T	G	D	M	L	F	R	I	A	D	E	T	G	I	V	L	L	P	G	R	G	F	G	S	N	.	.	.	R	P	S
Template Known Secondary structure						T	T	T	T	T	S				.			T	T	B			S																																								S								S	S		T	T	.	.	.	S
Template Predicted Secondary structure															.																																																													.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.				.	.	.
		365	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	R	L	C	F	A	K	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		G	R	A	S	L	A	N	L	N	E	Y	E	Y	A	A	I	G	R	A	L	R	K	M
Template Known Secondary structure						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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