Job Description P77806 Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012 Rank 43 Aligned Residues 371 % Identity 19% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		4	.	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		N	P	L	.	.	I	P	Q	S	K	L	P	Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	A	I	N	L	S	Q	G	.	.	.	.	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q
Query Conservation					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		N	P	L	A	Q	S	L	N	E	Q	L	Q	Q	S	N	A	T	A	F	A	M	L	S	D	L	G	Q	N	M	F	Y	P	K	G	I	L	S	Q	S	A	E	A	K	S	T	T	Y	N	A	T	I	G	M	A	T	N	K	D	G	K	M	F	A	S	S	L	D	A	M	F	N	D	L	T	P	D	E	I	F	P
Template Known Secondary structure																																			T									T	T	S	S	S					S	S				T	T										T	T		S	S			G	G	G	T	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140
Predicted Secondary structure																								.																																																					.
Query SS confidence																								.																																																					.
Query Sequence		Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	.	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	.	G	I	V	K
Query Conservation																								.																																																					.
Alig confidence																								.																																																					.
Template Conservation
Template Sequence		Y	A	P	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	V	N	Q	D	D	T	I	L	L	P	E	H	N	W	G	N	Y	K	L	V	F	N	T	R	N	G	A	N	L	Q
Template Known Secondary structure					T	T																		T	T			G	G	G	B							S																T	T							S	S			T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																											.	.	.																														.	.	.	.	.
Query SS confidence																											.	.	.																														.	.	.	.	.
Query Sequence		R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	.	.	.	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	.	.	.	.	.	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q
Query Conservation																											.	.	.																														.	.	.	.	.
Alig confidence																											.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		T	Y	P	I	F	D	K	D	G	H	Y	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	M	I	L	N	Y	P	N	N	P	T	G	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K	V	I	A	V	V	D	D	A	Y	Y	G	L	F	Y	E	D
Template Known Secondary structure						B		T	T	S		B		S												S	S								S	S		T	T	T																						T	T										T	T	T	T		B		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		213	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure									.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		Q	G	H	A	S	V	L	.	.	.	.	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	.	.	.	.	.	.	.	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L
Query Conservation									.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	T	T	K	E	V	L	E	A	K	V	K	G	L	I	R	S	N	I	S	S	G	P	L	P	T	Q	S	A	V	K	H	V	L
Template Known Secondary structure					S								T	T			T	T													T	T		G	G	G								B																				T	T	T	S	S													T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		282	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		R	A	E	P	E	H	Y	.	.	.	.	.	.	.	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																																									.	.	.
Template Conservation																																																								.	.	.
Template Sequence		K	N	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	G	Y	F	M	A	I	K	V	H	D	.	.	.	V	D	P	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	I	A	L	N	A
Template Known Secondary structure		T	T																											T		G	G	G	T	T	T								B	S	S							S	S	.	.	.	S													T								S	S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation																			.
Alig confidence			.	.	.	.	.	.	.	.									.
Template Conservation			.	.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	.	.	.	.	D	I	R	I	A	F	S	C	V	E	K	D	D	I	P	H	V	F	D	S	I	A	K
Template Known Secondary structure		S	.	.	.	.	.	.	.	.						G	G	G	S		G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.
Template SS confidence
		399									400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low