Job Description P77806 Confidence 99.97% Date Thu Jan 5 12:33:00 GMT 2012 Rank 103 Aligned Residues 328 % Identity 18% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N
Query Conservation
Alig confidence																																			.																.	.	.	.	.	.	.	.	.																				.
Template Conservation																																			.																.	.	.	.	.	.	.	.	.																				.
Template Sequence		L	L	V	G	R	P	N	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	G	G	P	L	.	V	R	E	F	E	E	R	V	A	G	L	A	G	V	R	.	.	.	.	.	.	.	.	.	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	G	L
Template Known Secondary structure				T	T																					T			S	S	S				.													T	S	S	.	.	.	.	.	.	.	.	.						S														.	T
Template Predicted Secondary structure																																			.																.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		2021	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.		.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.										.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.		.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G
Query Conservation
Alig confidence																																																								.	.	.											.	.	.
Template Conservation																																																								.	.	.											.	.	.
Template Sequence		T	G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S	A	V	V	.	.	.	G	V	H	L	W	G	R	P	C	A	.	.	.	A	D	Q	L	R	K	V	A	D	E
Template Known Secondary structure			S						S	S	S		T									T	T								B		T	T	T	S	S	B		S	T	T							T	T						.	.	.				G	G	G					.	.	.
Template Predicted Secondary structure																																																								.	.	.											.	.	.
Template SS confidence
		2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.				.	.	.	.	.	.	2150	.	.	.				.	.	.	.	.	.	2160	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.										.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	.	.	.	.	.	.	.	.	.	Y	L
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	.	.	.	.	.	.	.	A	V	D	G	R	P	A	G	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P
Template Known Secondary structure			T								T	T		T	T		.	.	.	.	.	.	.			T	T			T	T	S	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T			T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		2164	.	.	.	.	.	2170	.	.	.	.	.	.	.	.								.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	.	.	.	.	.	.	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G	I	H	R	D	L	V	M
Template Known Secondary structure		T				B		B																																		T		S		T	T						G	G	G	G	S	B																S	S
Template Predicted Secondary structure
Template SS confidence
		2237	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																		.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	L	I	R	L	C	F	A	K	.	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C
Template Known Secondary structure							T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		2317	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions