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Job DescriptionP77806
Confidence99.95%DateThu Jan 5 12:33:00 GMT 2012
Rank133Aligned Residues329
% Identity19%Templatec2ogeC_
PDB info PDB header:transferaseChain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITA
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Template Sequence  PFLDLKAAYEELR. . AETDAAIARVLDSG. . RYLLGPELEGFEAEFAAYCETD. . . . . . . . . HAVGVNSGMDALQLALRG
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T..T..

SSSTTSS.........S
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   11........20... ......30....... ..40.........50......... 60.........70.......
 
   111 ........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  L. VRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALW
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Template Sequence  LGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRA. . . LLPVHLYGHPADMD. . . ALR
Template Known Secondary structure  TT

TT
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TTT

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GGG

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GGG



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   78.80.........90.........100.........110.........120.........130.... .....140........ .150.
 
   190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  QAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYL. . . .
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Template Sequence  ELADRHGLHIVEDAAQAHGA. . . . . . . RYRGRRIGAGSSVAAFSFYPGNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQ
Template Known Secondary structure  TT


TT
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   152.......160.........170. ........180.........190.........200.........210.........220....
 
   266...270.........280.........290.........300........ .310.........320.........330.........
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Query Sequence  . . . . . TFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE. SRLEILPCEGTYFLLVDYSAVSTLDDVEFCQ
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Template Sequence  KYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDELRS
Template Known Secondary structure  TTB
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B



TTTT
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TT


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TT
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   226...230.........240.........250.........260.........270.........280.........290.........300.....
 
   340.........350.........360. ........370 .........380......
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Query Sequence  WLTQEHGVAAIPLSVFCADPFP. . . . . . . . . . . . . . . . . . . HKLIRLCFA. . KKESTLLAAAERLRQL
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Template Sequence  HL. DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREW
Template Known Secondary structure  .TTB

B
S
SS
GGGSGGGTTTS

TTS


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   306. ..310.........320.........330.........340.........350.........360.........370..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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