Job Description P77806 Confidence 99.84% Date Thu Jan 5 12:33:00 GMT 2012 Rank 205 Aligned Residues 282 % Identity 18% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	.	.	.	.	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q
Query Conservation																																																												.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.													.																							.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.													.
Template Sequence		N	C	L	E	K	A	V	A	A	L	D	G	A	K	.	.	.	.	.	.	.	.	.	Y	C	L	A	F	A	S	G	L	A	A	T	.	V	T	I	T	H	L	L	K	A	G	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	Y	F	R	Q	V	A	S	E	F	G	L	K	I	S	F	V	D	C	S
Template Known Secondary structure												T	T		S	.	.	.	.	.	.	.	.	.						S	S						.					T	T	S		T	T							S	S												T	G	G	G	T	T									S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.													.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	.	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L
Query Conservation																																																					.
Alig confidence		.	.	.	.	.	.																															.	.	.													.												.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																															.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	I	K	L	L	E	A	A	I	T	P	E	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	.	.	.	I	E	G	C	A	H	I	V	H	K	H	G	D	I	I	L	V	V	D	N	T	F	M	S	.	.	.	.	.	.	.	.	.	P	Y	F	Q	R	P	L	A
Template Known Secondary structure		.	.	.	.	.	.	S										T	T								S	S		T	T	T						.	.	.									T	T	S	S	S								T	T	T		.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																															.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
								139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.	.	200
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																	.												.
Query SS confidence																	.												.
Query Sequence		R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	.	M	T	G	W	K	V	G	Y	C	V	A	.	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L
Query Conservation																	.												.
Alig confidence																	.												.																																		.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		L	G	A	D	I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	A	V	P	S	P	I	D	C	Y	L	C	N	R	G	L	K	T	.	.	.	.	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V
Template Known Secondary structure		T	T		S						T	T	T	T	T	T		S	S	S																																									T	T	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.																			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query Sequence		V	N	A	L	N	E	S	R	L	E	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																											.	.	.	.	.	.	.	.
Template Conservation																																														.	.
Template Sequence		A	Q	F	L	E	S	N	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	.	.	T	L	Q	H	A	E	I	F	L	K	N	L	K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M
Template Known Secondary structure							T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S	.	.													S	S	S				S			S	S	S	S						G	G	G	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
													357	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	D	P	F	P	H	K	L	I	R	L	C	F	A	.	.	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		T	H	A	S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A
Template Known Secondary structure		T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions