Job Description P77806 Confidence 99.87% Date Thu Jan 5 12:33:00 GMT 2012 Rank 197 Aligned Residues 339 % Identity 13% Template c2jisA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp. Resolution 1.6 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	.
Query Conservation																																																																																	.
Alig confidence																																																						.	.	.																									.
Template Conservation																																																						.	.	.
Template Sequence		F	N	Q	L	F	S	G	L	D	P	H	A	L	A	G	R	I	I	T	E	S	L	N	T	S	Q	Y	T	Y	E	I	A	P	V	F	V	L	M	E	E	E	V	L	R	K	L	R	A	L	V	G	W	.	.	.	S	S	G	D	G	I	F	C	P	G	G	S	I	S	N	M	Y	A	V	N	L	A	R	Y	Q
Template Known Secondary structure			S	S	S																						T	T		T	T	T																				T		.	.	.	S	S							S	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
															114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	.	.	.	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	.	.	.	.	.	.	R	T	R	L	V	I	L	N	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.												.														.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		R	Y	P	D	C	K	Q	R	G	L	R	T	L	P	P	L	A	L	F	T	S	K	E	C	H	Y	S	I	Q	K	G	A	A	F	L	G	L	G	T	D	S	V	R	V	V	K	A	D	E	R	G	.	K	M	V	P	E	D	L	E	R	Q	I	G	M	A	E	A	E	G	A	V	P	F	L	V	S	A	T	S
Template Known Secondary structure				T	T						G	G	G	S									T	T	S		T									T	T	S		G	G	G						B		T	T	S	.		B															T	T										B
Template Predicted Secondary structure																																																					.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P
Query Conservation
Alig confidence												.	.	.																																															.	.
Template Conservation												.	.	.																																															.	.
Template Sequence		G	T	T	V	L	G	A	F	D	P	.	.	.	L	E	A	I	A	D	V	C	Q	R	H	G	L	W	L	H	V	D	A	A	W	G	G	S	V	L	L	S	Q	T	H	R	H	L	L	D	G	I	Q	R	A	D	S	V	A	W	.	.	N	P	H	K	L	L	A	A	G	L	Q	C	S	A	L	L	L	Q	D
Template Known Secondary structure		S		T	T	T			B			.	.	.												T								T	T	G	G	G	G	G	G		T	T	T	G	G	G	G	T	T	G	G	G		S					.	.		T	T	S	T	T				S								S
Template Predicted Secondary structure												.	.	.																																															.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		252	.	.	.	.	.	.	.	260												.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																																		.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																																																		.
Query Sequence		A	P	I	S	A	E	I	R	K	.	.	.	.	.	.	.	.	.	.	.	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	.	R	L	E	I	L	P	C	E	G	T
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																																																		.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation
Template Sequence		T	S	N	L	L	K	R	C	H	G	S	K	F	Y	D	V	A	L	D	T	G	D	K	V	V	Q	C	G	R	R	V	D	C	L	K	L	W	L	M	W	K	A	Q	G	D	Q	G	L	E	R	R	I	D	Q	A	F	V	L	A	R	Y	L	V	E	E	M	K	K	R	E	G	F	E	L	V	M	E	P	E	F
Template Known Secondary structure			S												S		G	G	G			G	G	G		S		S	S																																								T	S	T	T				S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		320	.	.	.	.	.	.	.	.	.	330	.	.	.															.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Query Sequence		Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	.	.	.	K	K	E	S	T	L	L	A	A	A	E	R
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.														.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		V	N	V	C	F	W	F	V	P	P	S	L	R	G	K	Q	E	S	P	D	Y	H	E	R	L	S	K	V	A	P	V	L	K	E	R	M	V	K	E	G	S	M	M	I	G	Y	Q	P	.	.	.	.	H	G	T	R	G	N	F	F	R	V	V	V	A	N	S	A	L	T	C	A	D	M	D	F	L	L	N	E
Template Known Secondary structure		S									G	G	G	T	T		T	T	S	T	T							T													T	S								.	.	.	.		T	T												T	T
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.					.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		383	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions