Job Description P77806 Confidence 99.97% Date Thu Jan 5 12:33:00 GMT 2012 Rank 104 Aligned Residues 328 % Identity 12% Template c2huuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine Resolution 2.10 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T
Query Conservation
Alig confidence											.	.																			.	.	.	.	.																									.	.
Template Conservation											.	.																			.	.	.	.	.																									.	.
Template Sequence		P	N	K	L	L	M	G	P	G	.	.	P	S	N	A	P	Q	R	V	L	D	A	M	S	R	P	I	L	G	.	.	.	.	.	H	L	H	P	E	T	L	K	I	M	D	D	I	K	E	G	V	R	Y	L	F	Q	T	N	.	.	N	I	A	T	F	C	L	S	A	S	G	H	G	G	M	E	A	T	L	C
Template Known Secondary structure								S	S	S	.	.												T	T	S					.	.	.	.	.	T	T	S																			T			.	.		S						S	S
Template Predicted Secondary structure											.	.																			.	.	.	.	.																									.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	.	.	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A
Query Conservation																						.	.
Alig confidence																						.	.																	.																																					.	.
Template Conservation																																								.																																					.	.
Template Sequence		N	L	L	E	D	G	D	V	I	L	I	G	H	T	G	H	W	G	D	R	S	A	D	M	A	T	R	Y	G	A	D	V	R	V	V	K	S	K	.	V	G	Q	S	L	S	L	D	E	I	R	D	A	L	L	I	H	K	P	S	V	L	F	L	T	Q	G	D	S	S	T	G	V	L	Q	G	.	.	L	E	G
Template Known Secondary structure						T	T								S	S													T	T										.	T	T																		S						S			T	T	T	T					.	.		T	T
Template Predicted Secondary structure																																								.																																					.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																								.																								.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																								.
Template Sequence		V	G	A	L	C	H	Q	H	N	C	L	L	I	V	D	T	V	A	S	L	.	.	.	.	.	.	.	.	.	G	G	A	P	M	F	M	D	R	W	E	I	D	A	M	Y	T	G	S	Q	V	L	G	.	A	P	P	G	I	T	P	V	S	F	S	H	R	A	V	E	R	Y	K	R	R	N	T	K	V	K	V
Template Known Secondary structure									T	T								T	T	T	B	.	.	.	.	.	.	.	.	.	T	T	B				T	T	T	T	T		S											.			S	S																T		S	S			S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
																					264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	.	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	.	.	.	G	T	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																															.	.	.
Template Conservation
Template Sequence		Y	Y	W	D	M	S	L	V	G	D	Y	W	G	C	F	G	R	P	R	I	Y	H	H	T	I	S	S	T	L	L	Y	G	L	R	E	A	I	A	M	A	C	E	E	G	L	P	A	L	I	A	R	H	E	D	C	A	K	R	L	Y	R	G	L	Q	D	A	G	F	E	L	Y	A	D	P	K	D	R	L	S	T
Template Known Secondary structure		G	G	G									T	T		S	S	S					S																																												T	T			B	S	S		G	G	G	B		T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	.	.	.	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation																																																		.	.	.
Alig confidence										.	.																										.	.	.	.										.	.	.
Template Conservation										.	.																										.	.	.	.
Template Sequence		V	T	T	I	K	V	P	Q	.	.	G	V	D	W	L	K	A	A	Q	Y	A	M	K	T	Y	L	V	E	I	S	G	G	L	G	P	.	.	.	.	T	A	G	Q	V	F	R	I	G	L	M	G	Q	N	A	T	T	E	R	V	D	R	V	L	Q	V	F	Q	E
Template Known Secondary structure									T	.	.	T																			B				G	G	.	.	.	.	G	T	T	T								G	G	G		S
Template Predicted Secondary structure										.	.																										.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions