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Job DescriptionP77806
Confidence99.97%DateThu Jan 5 12:33:00 GMT 2012
Rank109Aligned Residues353
% Identity15%Templatec2dkjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QLGTTIFTQMSALAQQ. HQAINLSQGFPDFDGPRYLQERLAHHVAQ. . . . . . . GANQYAPMTGVQALREAIAQKTERLYG
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Template Sequence  KRDEALFELIALEEKRQREGLELIASENF. . VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG
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   6...10.........20.........30.... .....40.........50.........60.........70.........80...
 
   86...90.........100.........110.........120.........130. ........140.........150.........160
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Query Sequence  YQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPA. . . . . IALSGGIVKRMALQPPHFRVDWQEFAALL
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Template Sequence  A. . . . AWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLA
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   84 .....90.........100.........110.........120.........130.........140.........150.........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHM
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Template Sequence  LEHRPKVIVAGASAYPRFW. . . . DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAH. . . . . VVTSTTHKTL. .
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   160.........170........ .180.........190.........200.........210........ .220........
 
   241........250.........260.........270 .........280.........290.........300.........310.......
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Query Sequence  TGWKVGYCVAPAPISAEIRKVHQYLTFSVN. . . TPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCE
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Template Sequence  RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGG
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   229230.........240.........250.........260.........270.........280.........290.........300........
 
   318 .320.........330.........340.........350........ .360........ .370.........380.....
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Query Sequence  G. TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCAD. . PFPHKLIRLC. . . . . . FAKKESTLLAAAERLRQ
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Template Sequence  TDNHLFLVDLRP. . KGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR
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   309310.........320 .........330.........340.........350.........360.........370.........380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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