Job Description P77806 Confidence 99.83% Date Thu Jan 5 12:33:00 GMT 2012 Rank 207 Aligned Residues 319 % Identity 13% Template c2cy8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201 Resolution 2.30 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	.	.	.	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																								.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		V	D	G	N	V	Y	L	D	F	F	G	G	H	G	A	L	V	L	G	H	G	H	P	R	V	N	A	A	I	A	E	A	L	S	H	G	V	Q	Y	A	A	S	H	P	L	E	V	R	W	A	E	R	I	V	A	A	F	P	S	I	.	.	.	.	.	.	.	.	R	K	L	R	F	T	G	S	G	T	E	T
Template Known Secondary structure		T	T							S		T	T	T	T	S		T	T		B	T													T	T	T		S	S		S	S																T	T		.	.	.	.	.	.	.	.	S						S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.
		104	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180
Predicted Secondary structure									.	.																																																																						.
Query SS confidence									.	.																																																																						.
Query Sequence		L	Y	A	A	I	T	A	.	.	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	.	W
Query Conservation									.	.																																																																						.
Alig confidence									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	L	A	L	R	V	A	R	A	F	T	G	R	R	M	I	L	R	F	E	G	T	T	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	I	R	P	D	D	I	E	G	M	R	E	V	F	A	N	H	G	S	D	I	A	A	F	I	A	E	P	V	G	S	H	F	G	V	T	P	V
Template Known Secondary structure																									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T													G	G	G								S	S						T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.															.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K
Query Conservation
Alig confidence																																														.	.	.	.	.	.									.
Template Conservation																																														.	.	.	.	.	.									.
Template Sequence		S	D	S	F	L	R	E	G	A	E	L	A	R	Q	Y	G	A	L	F	I	L	D	E	V	I	S	G	F	R	V	G	N	H	G	M	Q	A	L	L	D	V	Q	P	D	.	.	.	.	.	.	L	T	C	L	A	K	A	S	.	A	G	G	L	P	G	G	I	L	G	G	R	E	D	V	M	G	V	L	S	R
Template Known Secondary structure																T	T								T	T	T	T	T	T	T		T	T							T				S	.	.	.	.	.	.						G	G	G	.	G	T	T	S	S												T	T	S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.									.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.							.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																				.	.																									.	.	.	.
Query SS confidence																																																				.	.																									.	.	.	.
Query Sequence		V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	.	.	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	.	.	.	.
Query Conservation																																																				.	.																									.	.	.	.
Alig confidence		.	.																																																	.	.																									.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	S	F	T	G	N	P	I	T	A	A	A	A	I	A	A	I	D	T	I	L	E	D	D	V	C	A	K	I	N	D	L	G	Q	F	A	R	E	A	M	N	H	L	F	A	R	K	G	L	N	W	L	A	Y	G	R	F	S	G	F	H	L	M	P	G	L	P	P	N	T	T	D	T	G	S	I	T	R
Template Known Secondary structure		.	.																							T	T																							T	T									T	T							T	S		T	T									T
Template Predicted Secondary structure		.	.
Template SS confidence
				293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
												335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	V	A	R	P	D	V	K	M	I	A	A	M	R	M	A	L	I	L	E	G	V	D	I	G	G	.	.	.	.	.	.	.	.	.	.	R	G	S	V	F	L	S	A	Q	H	E	R	E	H	V	E	H	L	V	T	T	F	D	R	V
Template Known Secondary structure		T		S																		T	T				B	T	.	.	.	.	.	.	.	.	.	.	T	T						T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.											.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions