Job Description P77806 Confidence 99.88% Date Thu Jan 5 12:33:00 GMT 2012 Rank 192 Aligned Residues 305 % Identity 21% Template c2cb1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2. Resolution 2.0 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F
Query Conservation
Alig confidence																												.																.	.	.	.	.	.	.	.	.
Template Conservation																												.																.	.	.	.	.	.	.	.	.
Template Sequence		F	K	T	L	E	E	G	Q	E	R	F	A	T	G	E	G	Y	V	Y	A	R	Q	K	D	P	T	.	A	K	A	L	E	E	R	L	K	A	L	E	G	A	L	.	.	.	.	.	.	.	.	.	E	A	V	V	L	A	S	G	Q	A	A	T	F	A	A	L	L	A	L	L	R	P	G	D	E	V	V	A	A
Template Known Secondary structure			S	S													S		S	B	T	T	T					.													T		S	.	.	.	.	.	.	.	.	.						S	S											T	T			T	T
Template Predicted Secondary structure																												.																.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		122	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		D	P	S	Y	D	S	Y	A	P	A	I	A	L	.	.	.	.	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.										.	.	.	.	.	.	.																																.	.	.
Template Conservation																												.	.	.	.	.	.	.																																.	.	.
Template Sequence		K	G	L	F	G	Q	T	I	G	L	F	G	Q	V	L	S	L	M	G	V	T	V	R	Y	V	D	.	.	.	.	.	.	.	P	E	P	E	A	V	R	E	A	L	S	A	K	T	R	A	V	F	V	E	T	V	A	N	P	A	L	L	V	P	D	.	.	.	L	E	A	L	A	T	L	A	E	E	A	G	V
Template Known Secondary structure		T	T												T	T	T	T	T	T								.	.	.	.	.	.	.	S	S										T	T								S	S		T	T	T						.	.	.												T
Template Predicted Secondary structure																												.	.	.	.	.	.	.																																.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		A	L	V	V	D	N	T	F	G	A	A	.	.	.	.	.	.	.	.	G	A	L	C	R	P	L	A	W	G	A	H	V	V	V	E	S	L	T	W	A	S	G	H	G	S	V	L	G	G	A	V	L	S	R	E	T	E	L	W	R	N	Y	P	Q	F	L	Q	P	W	E	A	L	R	A	R	C	F	P	E	R
Template Known Secondary structure								G	G	G	T	T	.	.	.	.	.	.	.	.	T	T	S			G	G	G	G	T		S										S		S	S													S	G	G	G	G	S	G	G	G	G							G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
				259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.															.	.	.	.	320	.	.
Predicted Secondary structure		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	G	T	Y	F	L
Query Conservation		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	T	L	G	L	S	L	C	G	M	A	L	S	P	F	N	A	Y	L	L	F	Q	G	L	E	T	V	A	L	R	V	A	R	M	S	E	T	A	R	F	L	A	E	R	L	Q	G	H	P	K	V	K	A	L	R	Y	P	G	L	P	E	D	P	A	H	R	N	A	R	K	Y	L	A	S	G	G	P	I	L
Template Known Secondary structure							T	T	T	T																G	G	G																					T		T	T		S					T	T	S	T	T		T	T									S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.																								360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	H	K	L	I	R	L	C	F	A	K	.	K	E	S	T	L	L	A
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence							.	.	.	.	.	.																	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation							.	.	.	.	.	.																	.	.
Template Sequence		T	L	D	L	G	.	.	.	.	.	.	D	L	E	R	A	S	R	F	L	G	A	I	R	L	L	K	.	.	A	A	N	L	G	D	A	R	T	L	L	V	H	P	W	T	T	T	H	S	R	L	K	E	E	A	R	L	Q	A	G	V	T	P	G	L	V	R	V	S	V	G	L	E	D	P	L	D	L	L	A
Template Known Secondary structure						S	.	.	.	.	.	.	S												S	S			.	.		S			S		S	S						T	T	T	T	T	T	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure							.	.	.	.	.	.																	.	.
Template SS confidence
		332	.	.	.	.							.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		379	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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