Job Description P77806 Confidence 99.95% Date Thu Jan 5 12:33:00 GMT 2012 Rank 141 Aligned Residues 337 % Identity 14% Template c1oatB_ PDB info PDB header:aminotransferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase Resolution 2.50 Å

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		27	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure														.	.						.
Query SS confidence														.	.						.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	S	Q	G	.	.	F	P	D	F	D	.	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A
Query Conservation														.	.						.
Alig confidence														.	.						.																.	.																												.	.	.	.	.
Template Conservation																																					.	.																												.	.	.	.	.
Template Sequence		V	E	G	R	K	Y	F	D	F	L	S	S	Y	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	D	K	.	.	L	T	L	T	S	R	A	F	Y	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	F	N	Y	H	.	.	.	.	.	K	V	L	P	M	N	T	G	V	E	A
Template Known Secondary structure		T	T							S	S					T		T	T		B	T													T	T	.	.		S				T	T	S			S	S													T		S	.	.	.	.	.						S	S
Template Predicted Secondary structure																																					.	.																												.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.
		104	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query Sequence		L	Y	A	A	I	T	A	L	.	.	.	.	.	.	.	.	.	.	.	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	.	.	.	.	.	.	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	T	A	C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	P	N	V	A
Template Known Secondary structure																T	T				T	T								T	T					S	S					T	T								T	T	S		S			S	S						T	T									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		167	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		V	I	L	N	T	P	.	.	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K
Query Conservation								.	.
Alig confidence								.	.																																																						.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	.	.	.	.	.	I	V	L	L	G	K	A	L	S	G	G	L	Y	P
Template Known Secondary structure							S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S	.	.	.	.	.						G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.	.	.	.	300
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	.	.	L	E	I	L	P	C	E	G	T	Y	F	L
Query Conservation																																																																				.	.
Alig confidence																																								.	.																											.	.
Template Conservation																																								.	.
Template Sequence		V	S	A	V	L	C	D	D	D	I	M	L	T	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	.	.	V	L	E	E	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E	L	M	K	L	P	S	D	V	V	T	A	V	R	G	K	G	L	L	N
Template Known Secondary structure													T	T	S		T	T	S	S			S	S	T	T														.	.					T	T																	T	T	S		T	T	T								T	T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	.	.	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																																															.	.
Alig confidence																					.										.	.	.	.	.	.	.	.									.	.
Template Conservation																					.										.	.	.	.	.	.	.	.
Template Sequence		A	I	V	I	K	E	T	K	D	W	D	A	W	K	V	C	L	R	L	.	R	D	N	G	L	L	A	K	P	.	.	.	.	.	.	.	.	T	H	G	D	I	I	R	F	A	P	P	L	V	I	K	E	D	E	L	R	E	S	I	E	I	I	N	K	T
Template Known Secondary structure								B	T	T	B										.			T	T					B	.	.	.	.	.	.	.	.	S	S	S	S								T	T
Template Predicted Secondary structure																					.										.	.	.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.									.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions