Return to main results Retrieve Phyre Job Id

Job DescriptionP10346
Confidence99.93%DateWed Jan 25 15:20:37 GMT 2012
Rank61Aligned Residues197
% Identity14%Templated1cr2a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG
Query Conservation   
 
  
        

  

  
  


  
 
 








  
 
      
 
 
 
                
 
Alig confidence 





























































....












.
Template Conservation              
   

 
  

  
    
 
  
 




   
        
      ....
 
          .
Template Sequence  LSSEESVGLLFSGCTGINDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLA. . . . MLEESVEETAEDL.
Template Known Secondary structure  TS


S
B


S
TT
SB
TT

STTSSTS


....SSS
.
Template Predicted Secondary structure 
























....






.
Template SS confidence 















































































   279280.........290.........300.........310.........320.........330.........340 .........350...
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
Query Conservation   
 
   
    
  
 
                      
   

          

 


 
  

 

   
 



Alig confidence  ...........




































































Template Conservation  ...........                               
     
       

                  



Template Sequence  . . . . . . . . . . . IGLHNRVRLRQSDSLKREIIENGKFDQWFDELFGNDTFHLYDSFEAETDRLLAKLAYMRSGLGCDVIIL
Template Known Secondary structure  ...........TT

GGG
TSSSS






TT

S
Template Predicted Secondary structure  ...........





























Template SS confidence 















































































   354.....360.........370.........380.........390.........400.........410.........420..
 
   161........170.........180..... ....190.... .....200.........210......
Predicted Secondary structure 








.



.




Query SS confidence 
























.








.





















Query Sequence  DEPTSALDPELRHEVLKVMQDLAEE. GMTMVIVTH. EIGFAEKVASRLIFIDKGRIAE
Query Conservation 


  


          
      .
 


  

.         
 
  
  
 
  
Alig confidence 








...












.








.





















Template Conservation 
  
   
 ...      
   

  
  

 


  
  
    
 

 
       
Template Sequence  DHISIRKMI. . . DNLMTKLKGFAKSTGVVLVVICHLKSGALRQLSDTIIALERNNLVL
Template Known Secondary structure 

...





S


Template Predicted Secondary structure 



...









Template SS confidence 

























































   424.....430.. .......440.........450.........460.........470........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions