Return to main results Retrieve Phyre Job Id

Job DescriptionP10346
Confidence97.93%DateWed Jan 25 15:20:37 GMT 2012
Rank100Aligned Residues31
% Identity39%Templatec3qkuB_
PDB info PDB header:replicationChain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40........
Predicted Secondary structure 











Query SS confidence 































Query Sequence  LHNIDLNIAQGEVVVIIGPSGSGKSTLLRCIN
Query Conservation 
  

  
  


  
 
 








  
 
Alig confidence 










.



















Template Conservation       
 
   .
 

 
 








 

 
Template Sequence  HSDTVVEFKEG. INLIIGQNGSGKSSLLDAIL
Template Known Secondary structure 

S.
TTSS
Template Predicted Secondary structure 






.





Template SS confidence 































   14.....20.... .....30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions