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Job DescriptionP10346
Confidence97.04%DateWed Jan 25 15:20:37 GMT 2012
Rank144Aligned Residues100
% Identity17%Templatec2hcbC_
PDB info PDB header:replicationChain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGAN
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Template Sequence  IFIYGSVGTGKTHLLQAAGNEAKKRGYRVIY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SS
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Query Sequence  KEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEP. TSALDPELRHEVLKVMQDLAEEGMT
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Template Sequence  ADDFAQAMVEHLKKGTI. . . . . . . . . . . . . . . . . . . NEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQ
Template Known Secondary structure  T

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   148.150.........160.... .....170.........180.........190.........200........
 
   189190.....
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Query Sequence  MVIVTHE
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Template Sequence  IILASDR
Template Known Secondary structure  SS
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   209210.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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