Job Description P10346 Confidence 100.00% Date Wed Jan 25 15:20:37 GMT 2012 Rank 8 Aligned Residues 234 % Identity 41% Template c1z47B_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	E	F	K	N	V	S	K	H	F	.	G	P	T	Q	V	L	H	N	I	D	L	N	I	A	Q	G	E	V	V	V	I	I	G	P	S	G	S	G	K	S	T	L	L	R	C	I	N	K	L	E	E	I	T	S	G	D	L	I	V	D	G	L	K	V	N	D	P	K	V	D	E	R	L	I	R	Q	E	A	G
Query Conservation												.
Alig confidence												.																																																															.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		I	E	F	V	G	V	E	K	I	Y	P	G	G	A	R	S	V	R	G	V	S	F	Q	I	R	E	G	E	M	V	G	L	L	G	P	S	G	S	G	K	T	T	I	L	R	L	I	A	G	L	E	R	P	T	K	G	D	V	W	I	G	G	K	R	V	T	D	L	P	P	Q	K	R	.	.	.	.	N	V	G
Template Known Secondary structure												T	T	S	T	T											T	T								S	T	T	S	S										T	S	S			S							T	T				T	T			G	G	G	S	.	.	.	.	S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	F	Q	Q	F	Y	L	F	P	H	L	T	A	L	E	N	V	M	F	G	P	L	R	V	R	G	A	N	K	E	E	A	E	K	L	A	R	E	L	L	A	K	V	G	L	A	E	R	A	H	H	Y	P	S	E	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	A	V	K	P	K	M	M	L	F
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		L	V	F	Q	N	Y	A	L	F	Q	H	M	T	V	Y	D	N	V	S	F	G	L	.	R	E	K	R	V	P	K	D	E	M	D	A	R	V	R	E	L	L	R	F	M	R	L	E	S	Y	A	N	R	F	P	H	E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	A	P	R	P	Q	V	L	L	F
Template Known Secondary structure					T	T					T	T	S								T	T	G	.	G	G	T	T																	T	T		G	G	G	T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure																								.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		D	E	P	T	S	A	L	D	P	E	L	R	H	E	V	L	K	V	M	Q	D	L	A	E	E	.	G	M	T	M	V	I	V	T	H	E	I	G	F	A	E	K	V	A	S	R	L	I	F	I	D	K	G	R	I	A	E	D	G	N	P	Q	V	L	I	K	N	P	P	S	Q	R	L	Q	E	F	L	Q	H	V
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		D	E	P	F	A	A	I	D	T	Q	I	R	R	E	L	R	T	F	V	R	Q	V	H	D	E	M	G	V	T	S	V	F	V	T	H	D	Q	E	E	A	L	E	V	A	D	R	V	L	V	L	H	E	G	N	V	E	Q	F	G	T	P	E	E	V	Y	E	K	P	G	T	L	F	V	A	S	F	I	G	E	S
Template Known Secondary structure			S	T	T	T	T	S																												S										S							T	T														S		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		240
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		250

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions