Job Description P10346 Confidence 100.00% Date Wed Jan 25 15:20:37 GMT 2012 Rank 17 Aligned Residues 222 % Identity 36% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	F	K	N	V	S	K	H	F	G	P	T	Q	V	L	H	N	I	D	L	N	I	A	Q	G	E	V	V	V	I	I	G	P	S	G	S	G	K	S	T	L	L	R	C	I	N	K	L	E	E	I	T	S	G	D	L	I	V	D	G	L	K	V	N	D	P	K	V	D	E	R	L	I	R	Q	E	A	G	M
Query Conservation
Alig confidence																																																																										.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		V	K	L	E	N	L	T	K	R	F	G	N	F	T	A	V	N	K	L	N	L	T	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	M	I	A	G	L	E	E	P	T	E	G	R	I	Y	F	G	D	R	D	V	T	Y	L	P	P	K	D	R	.	.	.	.	N	I	S	M
Template Known Secondary structure												T	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S		G	G	G	T	.	.	.	.	T
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	Q	Q	F	Y	L	F	P	H	L	T	A	L	E	N	V	M	F	G	P	L	R	V	R	G	A	N	K	E	E	A	E	K	L	A	R	E	L	L	A	K	V	G	L	A	E	R	A	H	H	Y	P	S	E	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	A	V	K	P	K	M	M	L	F	D
Query Conservation
Alig confidence					.	.	.	.	.	.											.	.	.
Template Conservation					.	.	.	.	.	.											.	.	.
Template Sequence		V	F	Q	.	.	.	.	.	.	H	M	T	V	Y	E	N	I	A	F	.	.	.	P	L	K	K	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	E	E	L	L	N	R	Y	P	A	Q	L	S	G	G	Q	R	Q	R	V	A	V	A	R	A	I	V	V	E	P	D	V	L	L	M	D
Template Known Secondary structure					.	.	.	.	.	.										T	.	.	.	T																				T	T		G	G	G	T	T			G	G	G			S	S												T	T			S
Template Predicted Secondary structure					.	.	.	.	.	.											.	.	.
Template SS confidence
		89	90	.							.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		E	P	T	S	A	L	D	P	E	L	R	H	E	V	L	K	V	M	Q	D	L	.	A	E	E	G	M	T	M	V	I	V	T	H	E	I	G	F	A	E	K	V	A	S	R	L	I	F	I	D	K	G	R	I	A	E	D	G	N	P	Q	V	L	I	K	N	P	P	S	Q	R	L	Q	E	F	L
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		E	P	L	S	N	L	D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K	L	K	V	T	T	I	Y	V	T	H	D	Q	V	E	A	M	T	M	G	D	R	I	A	V	M	N	R	G	Q	L	L	Q	I	G	S	P	T	E	V	Y	L	R	P	N	S	V	F	V	A	T	F	I
Template Known Secondary structure		S	T	T	T	T	S																												S										S							T	T														S		S	B							S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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