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Job DescriptionP10346
Confidence98.48%DateWed Jan 25 15:20:37 GMT 2012
Rank89Aligned Residues122
% Identity26%Templatec1ewqA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40........ .50.........60.........70.........80.........90......
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Query Sequence  QGEVVVIIGPSGSGKSTLLRCIN. . . . . . . . . KLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALE
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Template Sequence  AHELVLITGPNXAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGA. . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
S
SSSSTTT

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   575....580.........590.........600.........610.........620........
 
   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  NVMFGPLRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . GKSTFXV. . . . . . . . . EXEEVALILKEATENSLVLLDEVGRGTSSLDGVAIA
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   635....640. ........650.........660.........670.......
 
   177 ..180.........190.........200.........210
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Query Sequence  K. VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFID
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Template Sequence  TAVAEALHERRAYTLFATHYFELTALGLPRLKNLH
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   678.680.........690.........700.........710..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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