Job Description P77607 Confidence 99.74% Date Thu Jan 5 12:30:58 GMT 2012 Rank 13 Aligned Residues 132 % Identity 11% Template c3lhkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. Resolution 2.20 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure															.	.																																																				.	.
Query SS confidence															.	.																																																				.	.
Query Sequence		R	S	F	F	Y	T	I	C	S	S	E	Q	Q	.	.	E	S	I	T	D	H	H	S	L	A	E	I	C	Q	K	F	N	I	L	P	E	H	V	V	I	E	Q	V	D	I	K	E	V	V	S	E	Q	R	L	L	R	Q	L	I	H	H	E	M	N	R	Q	.	.	D	T	L	V	I	P	D	L	S	C	L	G
Query Conservation															.	.																																																				.	.
Alig confidence															.	.																				.														.	.											.						.	.
Template Conservation																																				.														.	.											.
Template Sequence		K	I	I	G	Y	A	R	V	S	F	N	A	Q	K	D	D	L	E	R	Q	I	Q	L	I	K	S	Y	A	E	E	N	G	W	D	.	I	Q	I	L	K	D	I	G	S	G	L	N	E	.	.	K	R	K	N	Y	K	K	L	L	K	.	X	V	X	N	R	K	V	E	K	V	I	I	A	Y	P	D	R	L	T
Template Known Secondary structure										S	S	G	G	G																		T	T			.								S		T	T		T	.	.	T										.				T	T								S	S
Template Predicted Secondary structure																																				.														.	.											.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		R	T	V	E	D	L	Q	N	I	L	F	F	C	L	Q	K	E	M	F	I	Y	S	Y	H	P	A	S	R	I	E	P	S	A	E	S	C	L	S	F	L	I	A	R	Q	D	T	I	D	I	.	.	.	.	.	.	.	H	N	L	K	S	T	K	S	R	Y	R	H	V	K	K
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence										.	.																			.	.																				.	.	.	.	.	.	.
Template Conservation										.	.																			.	.
Template Sequence		R	F	G	F	E	T	L	K	.	.	E	F	F	K	S	Y	G	T	E	I	V	I	I	N	K	K	H	K	.	.	T	P	Q	E	E	L	V	E	D	L	I	T	I	V	S	H	F	A	G	K	L	Y	G	X	H	S	H	K	Y	K	K	L	T	K	T	V	K	E	I	V	R
Template Known Secondary structure		S	S							.	.						T	T						S		S	S			.	.																								T	T																T
Template Predicted Secondary structure										.	.																			.	.
Template SS confidence
		139	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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