Job Description P77607 Confidence 23.99% Date Thu Jan 5 12:30:58 GMT 2012 Rank 412 Aligned Residues 89 % Identity 12% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		A	E	I	C	Q	K	F	N	I	L	P	E	H	V	V	I	E	Q	V	D	I	K	E	V	V	S	E	Q	.	.	R	L	L	R	Q	L	I	H	H	E	M	N	R	Q	D	T	L	V	I	P	D	L	S	C	L	G	R	T	V	E	D	L	Q	N	I	L	F	F	C	L	Q	K	E	M	F	I	Y	S	Y	H
Query Conservation																														.	.
Alig confidence													.																	.	.																						.	.	.	.
Template Conservation													.																																								.	.	.	.
Template Sequence		Q	K	L	V	E	K	F	N	L	K	R	.	A	L	I	S	L	D	Q	P	N	T	N	E	Q	R	K	Q	V	A	A	L	V	S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	Q	.	.	.	.	G	Q	N	V	A	A	V	A	D	H	A	G	I	V	T	Q	R	N	A	R	F	V	S	A	I
Template Known Secondary structure									T		S		.								S	S																						T	T								.	.	.	.	S																							S	B
Template Predicted Secondary structure													.																																								.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	S	R	I	E	P	S	A	E	S	C	L	S	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	T	H	I	I	N	A	D	H	I	C	R	R	L	A
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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