Return to main results Retrieve Phyre Job Id

Job DescriptionP77607
Confidence99.82%DateThu Jan 5 12:30:58 GMT 2012
Rank8Aligned Residues138
% Identity10%Templatec3guvA_
PDB info PDB header:recombinationChain: A: PDB Molecule:site-specific recombinase, resolvase family protein; PDBTitle: crystal structure of a resolvase family site-specific recombinase from2 streptococcus pneumoniae
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50........ .60.........70.........80.........90......... 100.........110.....
Predicted Secondary structure 




....







...




Query SS confidence 















. . . .








































. . .















Query Sequence  QMRSFFYTICSSEQQE. . . . SITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQ. . . LIHHEMNRQDTLVIPD
Query Conservation   
    
 



  
 ....   
   
   
    
    

 
  

      
     ...

   
  





  
Alig confidence 















....








































...















Template Conservation   

   
 



  
    

  
                    
                            
 


  
Template Sequence  KIKVYLYTRVSTSIQIEGYSLEAQKSRMKAFAIYNDYEIVGEYEDAGKSGKSIEGRIQFNRMMEDIKSGKDGVSFVLVFK
Template Known Secondary structure 


SS
GGGTT



SSSSS


T
TT

SS
Template Predicted Secondary structure 



























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   116...120.........130.........140.........150.........160......... 170.........180..
Predicted Secondary structure 












....
Query SS confidence 





















































. . . .












Query Sequence  LSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDI. . . . HNLKSTKSRYRHV
Query Conservation 






  


 

  
 



 
 

 
   
       
  
    

 
 ....



 

  


 
Alig confidence 
































..


















....












Template Conservation   


 
           
   

 
        ..         
    
  
      
   
    


Template Sequence  LSRFARNAADVLSTLQIMQDYGVNLICVEDGID. . SSKDKLMISVLSAVAEIERENIRIQTMEGCIQKARE
Template Known Secondary structure  GGGT
SSTT
TTTT..GGG

TT
Template Predicted Secondary structure 















..



Template SS confidence 






































































   85....90.........100.........110....... ..120.........130.........140.........150...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions