Job Description P77607 Confidence 99.77% Date Thu Jan 5 12:30:58 GMT 2012 Rank 10 Aligned Residues 123 % Identity 14% Template c3bvpB_ PDB info PDB header:recombination Chain: B: PDB Molecule:tp901-1 integrase; PDBTitle: crystal structure of the n-terminal catalytic domain of tp901-12 integrase Resolution 2.10 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		R	S	F	F	Y	T	I	C	S	S	E	Q	Q	E	S	I	T	D	H	H	S	L	A	E	I	C	Q	K	F	N	I	L	P	E	H	V	V	I	E	Q	V	D	I	K	E	V	V	S	E	Q	R	L	L	R	Q	L	I	H	H	E	M	N	R	Q	.	.	D	T	L	V	I	P	D	L	S	C	L	G	R	T
Query Conservation																																																																		.	.
Alig confidence													.																																			.												.						.	.
Template Conservation													.																																			.												.
Template Sequence		K	V	A	I	Y	T	R	V	S	T	G	.	F	S	I	D	E	Q	I	D	R	L	T	K	Y	A	E	A	M	G	W	Q	V	S	D	T	Y	T	D	A	G	F	S	G	A	K	.	L	E	R	P	A	M	Q	R	L	I	N	.	D	I	E	N	K	A	F	D	T	V	L	V	Y	K	L	D	R	L	S	R	S
Template Known Secondary structure													.																		T											T			S	S	S	.	S											.		G	G	G	T			S					S	S						S
Template Predicted Secondary structure													.																																			.												.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	E	D	L	Q	N	I	L	F	F	C	L	Q	K	E	.	M	F	I	Y	S	Y	H	P	A	S	R	I	E	P	S	A	E	S	C	L	S	F	L	I	A	R	Q	D	T	I	D	I	H
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		V	R	D	T	L	Y	L	V	K	D	V	F	T	K	N	K	I	D	F	I	S	L	N	E	S	I	D	T	S	S	A	M	G	S	L	F	L	T	I	L	S	A	I	N	E	F	E	R	E
Template Known Secondary structure												T	T	G	G	G	T						T	T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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