Job Description P77607 Confidence 99.95% Date Thu Jan 5 12:30:58 GMT 2012 Rank 2 Aligned Residues 171 % Identity 17% Template c2r0qF_ PDB info PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex Resolution 3.20 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	S	F	F	Y	T	I	C	S	S	E	Q	Q	E	S	I	T	D	H	H	S	L	A	E	I	C	Q	K	F	N	I	L	P	E	H	V	V	I	E	Q	V	D	I	K	E	V	V	S	E	Q	R	L	L	R	Q	L	I	H	H	E	M	N	R	Q	D	T	L	V	I	P	D	L	S	C	L	G	R	T	V
Query Conservation
Alig confidence				.																										.	.	.	.	.	.							.	.	.	.	.	.	.	.												.
Template Conservation				.																										.	.	.	.	.	.							.	.	.	.	.	.	.	.												.
Template Sequence		M	I	.	I	G	Y	A	R	V	S	S	L	D	Q	N	L	E	R	Q	L	E	N	L	K	T	F	G	A	.	.	.	.	.	.	E	K	I	F	T	E	.	.	.	.	.	.	.	.	K	N	R	P	I	L	Q	K	A	L	N	.	F	V	R	M	G	D	R	F	I	V	E	S	I	D	R	L	G	R	N	Y
Template Known Secondary structure				.							B	T	T	B	T	T	T									T	T	T		.	.	.	.	.	.	S						.	.	.	.	.	.	.	.												.				T	T						S	S	G	G	G	G		S	S
Template Predicted Secondary structure				.																										.	.	.	.	.	.							.	.	.	.	.	.	.	.												.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170											.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	L	Q	N	I	L	F	F	C	L	Q	K	E	M	F	I	Y	S	Y	H	P	A	S	R	I	E	P	S	A	E	S	C	L	S	F	L	I	A	R	Q	D	T	I	D	I	H	.	.	.	.	.	.	.	.	.	.	N	L	K	S	T	K	S	R	Y	R	H	V	K	K	K	L	G	R	K	E	G	S	K
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	V	I	H	T	V	N	Y	L	K	D	K	E	V	Q	L	M	I	T	S	L	P	M	M	N	E	V	I	G	N	P	L	L	D	K	F	M	K	D	L	I	I	Q	I	L	A	M	V	S	E	Q	E	R	N	E	S	K	Q	A	Q	G	I	Q	V	A	K	E	K	G	V	Y	K	G	R	P	L	L	Y	S
Template Known Secondary structure															T						T	T	S	T	T					T	T																							T	T	T	T				T	T	T	T	S	S	S	S	S	S	S				S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		194	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	.	.	.	.	.	.	.	.	.	.	R	D	I	T	I	L	K	K	G	G	F	T	Q	A	E	I	A	K	K	L	S	I	S	L	S	T	V	K	R	H	W	N	N	G	I
Query Conservation				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	A	K	D	P	Q	K	R	V	I	Y	H	R	V	V	E	M	L	E	E	G	Q	A	I	S	K	I	A	K	E	V	N	I	T	R	Q	T	V	Y	R	I	K	H	D	N	G
Template Known Secondary structure		T	T		S	S																T	T											T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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