Return to main results Retrieve Phyre Job Id

Job DescriptionP77607
Confidence84.34%DateThu Jan 5 12:30:58 GMT 2012
Rank205Aligned Residues34
% Identity12%Templatec2ewtA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of the dna-binding domain of bldd
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210...... ...220........
Predicted Secondary structure 




..





Query SS confidence 





















. .











Query Sequence  RRDITILKKGGFTQAEIAKKLS. . ISLSTVKRHWNN
Query Conservation     
  
   
 
  



 

..








 
 
Alig confidence 





















..











Template Conservation    

  
   



  

   
  

   

  
 
Template Sequence  AKLRAIRTQQGLSLHGVEEKSQGRWKAVVVGSYERG
Template Known Secondary structure  TT

TTTSS
T
Template Predicted Secondary structure 








Template SS confidence 



































   11........20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions