 |
| Job Description | Q9JMT4 | | Confidence | 6.94% | Date | Thu Jan 5 12:38:09 GMT 2012 |
| Rank | 27 | Aligned Residues | 32 |
| % Identity | 13% | Template | d1xsva_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| YlxM/p13-like
|
| Resolution | 1.70 |
|
| | |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|  | | | | | | | |
|
|
|
| | | | | | | | |
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
K | Q | V | I | I | A | C | I | K | K | G | F | S | F | A | E | I | V | N | F | L | N | I | N | A | R | T | L | V | N | Y | L |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
| |
| |
| | | |
|
| | |
|
|
| | |
|
|
|
| | |
|
| | | |
|
| Template Sequence | |
R | N | Y | L | E | L | F | Y | L | E | D | Y | S | L | S | E | I | A | D | T | F | N | V | S | R | Q | A | V | Y | D | N | I |
| Template Known Secondary structure | |
| | | | | | | | T | S |
|
|
| | | | | | | | T | T |
|
| | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
|
| | | | | | | | |
|
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
