Email l.a.kelley@imperial.ac.uk Description P16687 Date Thu Jan 5 11:35:34 GMT 2012 Unique Job ID 1d1582f900d402b7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1tr8A_ 64.9 39 PDB header:chaperone Chain: A: PDB Molecule:conserved protein (mth177); PDBTitle: crystal structure of archaeal nascent polypeptide-associated complex2 (aenac) 2 d1vega_ 40.9 25 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 3 d1veja1 36.6 31 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 4 d2bwba1 36.6 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 5 c2cwbA_ 36.2 34 PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin 6 c2dahA_ 35.8 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3 7 d1vdla_ 35.8 29 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 8 c1wr1B_ 31.1 25 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 9 c2jy5A_ 30.2 31 PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain 10 d1ifya_ 28.3 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 11 d1aipc1 28.1 47 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 12 c2dnaA_ 27.6 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna 13 c2d9sA_ 27.4 29 PDB header:ligase Chain: A: PDB Molecule:cbl e3 ubiquitin protein ligase; PDBTitle: solution structure of rsgi ruh-049, a uba domain from mouse2 cdna 14 d1oqya1 27.3 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 15 d2dnaa1 25.0 25 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 16 c2dchX_ 25.0 50 PDB header:hydrolase Chain: X: PDB Molecule:putative homing endonuclease; PDBTitle: crystal structure of archaeal intron-encoded homing endonuclease i-2 tsp061i 17 d1xb2b1 24.1 35 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 18 d1z96a1 24.0 38 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 19 d2cp9a1 23.0 35 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 20 d1ir1s_ 22.8 26 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 21 d2daha1 not modelled 21.9 28 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 22 d1efub3 not modelled 21.1 47 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 23 c2do6A_ not modelled 20.7 26 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of rsgi ruh-065, a uba domain from human2 cdna 24 d1rbli_ not modelled 18.6 37 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 25 c1umqA_ not modelled 16.5 17 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 26 d1umqa_ not modelled 16.5 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 27 d1etxa_ not modelled 15.8 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 28 d1uzhc1 not modelled 15.4 37 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 29 d1fipa_ not modelled 15.1 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 30 c3lwfD_ not modelled 15.1 15 PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution 31 d1ngka_ not modelled 14.5 18 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 32 c3d19E_ not modelled 14.1 25 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:conserved metalloprotein; PDBTitle: crystal structure of a conserved metalloprotein from bacillus cereus 33 d1bwvs_ not modelled 14.0 32 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 34 d1bxni_ not modelled 13.6 42 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 35 d1svdm1 not modelled 13.1 26 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 36 d1ylfa1 not modelled 12.9 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator Rrf2 37 c2jnhA_ not modelled 12.9 28 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of the uba domain from cbl-b 38 d1x38a2 not modelled 12.6 31 Fold:Flavodoxin-like Superfamily:Beta-D-glucan exohydrolase, C-terminal domain Family:Beta-D-glucan exohydrolase, C-terminal domain 39 d1wiva_ not modelled 12.1 33 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 40 c3zv0A_ not modelled 12.0 24 PDB header:cell cycle Chain: A: PDB Molecule:protein shq1; PDBTitle: structure of the shq1p-cbf5p complex 41 d1etob_ not modelled 11.4 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 42 c3iv1F_ not modelled 11.0 47 PDB header:hydrolase Chain: F: PDB Molecule:tumor susceptibility gene 101 protein; PDBTitle: coiled-coil domain of tumor susceptibility gene 101 43 d1ejxc2 not modelled 10.6 34 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:alpha-subunit of urease, catalytic domain 44 c2y75F_ not modelled 10.1 24 PDB header:transcription Chain: F: PDB Molecule:hth-type transcriptional regulator cymr; PDBTitle: the structure of cymr (yrzc) the global cysteine regulator2 of b. subtilis 45 c2cosA_ not modelled 10.0 41 PDB header:transferase Chain: A: PDB Molecule:serine/threonine protein kinase lats2; PDBTitle: solution structure of rsgi ruh-038, a uba domain from mouse2 lats2 (large tumor suppressor homolog 2) 46 d1id3c_ not modelled 10.0 27 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 47 c3ju8B_ not modelled 9.7 10 PDB header:oxidoreductase Chain: B: PDB Molecule:succinylglutamic semialdehyde dehydrogenase; PDBTitle: crystal structure of succinylglutamic semialdehyde dehydrogenase from2 pseudomonas aeruginosa. 48 c2bmmA_ not modelled 9.5 15 PDB header:oxygen storage/transport Chain: A: PDB Molecule:thermostable hemoglobin from thermobifida fusca; PDBTitle: x-ray structure of a novel thermostable hemoglobin from the2 actinobacterium thermobifida fusca 49 d1v92a_ not modelled 9.4 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 50 d1bdfa1 not modelled 9.4 24 Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain 51 d8ruci_ not modelled 9.1 26 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 52 d2ezia_ not modelled 8.9 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 53 d1k3ra1 not modelled 8.4 42 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Hypothetical protein MTH1 (MT0001), insert domain 54 c2dakA_ not modelled 8.4 24 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the second uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 55 d1wdds_ not modelled 8.1 26 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 56 d1e9yb2 not modelled 8.1 28 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:alpha-subunit of urease, catalytic domain 57 d1q8ba_ not modelled 8.1 27 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Hypothetical protein YjcS 58 d2ezha_ not modelled 8.0 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 59 d1gk8i_ not modelled 8.0 37 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 60 c1zvaA_ not modelled 8.0 64 PDB header:viral protein Chain: A: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion 61 d2v6ai1 not modelled 7.9 37 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 62 d2f2ga1 not modelled 7.8 43 Fold:Heme oxygenase-like Superfamily:Heme oxygenase-like Family:TENA/THI-4 63 c3f44A_ not modelled 7.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:putative monooxygenase; PDBTitle: crystal structure of putative monooxygenase (yp_193413.1) from2 lactobacillus acidophilus ncfm at 1.55 a resolution 64 c3iukB_ not modelled 7.2 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of putative bacterial protein of unknown function2 (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold3 similar to that of m32 carboxypeptidases 65 d1ej7s_ not modelled 7.1 26 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 66 d2jssa1 not modelled 7.0 27 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 67 d1uzdc1 not modelled 7.0 37 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 68 c1ygmA_ not modelled 7.0 47 PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein bsu31320; PDBTitle: nmr structure of mistic 69 d2hkja2 not modelled 6.9 36 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:DNA gyrase/MutL, second domain 70 d2f5va2 not modelled 6.9 20 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:GMC oxidoreductases 71 c2f8nK_ not modelled 6.8 33 PDB header:structural protein/dna Chain: K: PDB Molecule:histone h2a type 1; PDBTitle: 2.9 angstrom x-ray structure of hybrid macroh2a nucleosomes 72 c3lk6A_ not modelled 6.8 20 PDB header:hydrolase Chain: A: PDB Molecule:lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase n318d mutant (ybbd_n318d) from bacillus subtilis 73 d1ntca_ not modelled 6.7 31 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 74 c3e7lD_ not modelled 6.6 10 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 75 d1tzya_ not modelled 6.6 33 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 76 c2kzhA_ not modelled 6.5 13 PDB header:isomerase Chain: A: PDB Molecule:tryptophan biosynthesis protein trpcf; PDBTitle: three-dimensional structure of a truncated phosphoribosylanthranilate2 isomerase (residues 255-384) from escherichia coli 77 d1kx3c_ not modelled 6.5 33 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 78 d1u35c1 not modelled 6.4 20 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 79 c3cxjB_ not modelled 6.4 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from2 methanothermobacter thermautotrophicus 80 d2g3qa1 not modelled 6.3 34 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 81 c2rdxG_ not modelled 6.2 21 PDB header:structural genomics, unknown function Chain: G: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, putative; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from roseovarius nubinhibens ism 82 c2o4wA_ not modelled 6.1 31 PDB header:hydrolase Chain: A: PDB Molecule:lysozyme; PDBTitle: t4 lysozyme circular permutant 83 c3exqA_ not modelled 6.1 26 PDB header:hydrolase Chain: A: PDB Molecule:nudix family hydrolase; PDBTitle: crystal structure of a nudix family hydrolase from2 lactobacillus brevis 84 d1f66c_ not modelled 6.0 27 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 85 c1f66C_ not modelled 6.0 27 PDB header:structural protein/dna Chain: C: PDB Molecule:histone h2a.z; PDBTitle: 2.6 a crystal structure of a nucleosome core particle2 containing the variant histone h2a.z 86 d2cosa1 not modelled 5.9 41 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 87 d1cuka1 not modelled 5.9 50 Fold:RuvA C-terminal domain-like Superfamily:DNA helicase RuvA subunit, C-terminal domain Family:DNA helicase RuvA subunit, C-terminal domain 88 c1xb2B_ not modelled 5.8 35 PDB header:translation Chain: B: PDB Molecule:elongation factor ts, mitochondrial; PDBTitle: crystal structure of bos taurus mitochondrial elongation2 factor tu/ts complex 89 c2jssA_ not modelled 5.8 27 PDB header:chaperone/nuclear protein Chain: A: PDB Molecule:chimera of histone h2b.1 and histone h2a.z; PDBTitle: nmr structure of chaperone chz1 complexed with histone2 h2a.z-h2b 90 c3osyA_ not modelled 5.8 41 PDB header:hydrolase Chain: A: PDB Molecule:3c protease; PDBTitle: human enterovirus 71 3c protease 91 d1hioa_ not modelled 5.7 33 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 92 d1mxaa1 not modelled 5.7 23 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 93 d1eqza_ not modelled 5.6 33 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 94 d2p02a1 not modelled 5.5 31 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 95 d1qm4a1 not modelled 5.5 23 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 96 d1euha_ not modelled 5.5 17 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 97 c3kn1A_ not modelled 5.4 21 PDB header:protein binding Chain: A: PDB Molecule:golgi phosphoprotein 3; PDBTitle: crystal structure of golgi phosphoprotein 3 n-term2 truncation variant 98 c3c38A_ not modelled 5.4 11 PDB header:signaling protein, transferase Chain: A: PDB Molecule:autoinducer 2 sensor kinase/phosphatase luxq; PDBTitle: crystal structure of the periplasmic domain of vibrio2 cholerae luxq 99 c3bmxB_ not modelled 5.4 20 PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase (ybbd) from bacillus subtilis