 |
Job Description | P0AFD1 | Confidence | 22.67% | Date | Thu Jan 5 11:25:57 GMT 2012 |
Rank | 251 | Aligned Residues | 35 |
% Identity | 11% | Template | d2isya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Iron-dependent repressor protein
|
Resolution | 1.96 |
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | A | L | K | I | V | Q | K | Q | R | G | W | V | P | D | G | A | I | H | A | I | A | D | V | L | G | I | P | A | S | D | V | E | G | V | A | T |
Query Conservation |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   | . | . | . |   |   |
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|
|
Template Sequence |   |
L | R | T | I | Y | D | L | E | E | E | G | V | T | P | L | R | . |
. |
. |
A | R | I | A | E | R | L | D | Q | S | G | P | T | V | S | Q | T | V | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|