Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFD1
Confidence50.11%DateThu Jan 5 11:25:57 GMT 2012
Rank51Aligned Residues43
% Identity23%Templated2fd5a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80..
Predicted Secondary structure 









Query SS confidence 

















































Query Sequence  RAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQ
Query Conservation     

  
  

   
 

  
   

  
 
    
  
 


  
   
Alig confidence 


















.














......








Template Conservation 
  
  

  
    
   . 

  

  



  ......
 
  
  
Template Sequence  RARILGAATQALLERGAVE. PSVGEVMGAAGLTVG. . . . . . GFYAHFQSK
Template Known Secondary structure  TTTS.

TT

GG......GGGGT
S
Template Predicted Secondary structure 



.




......




Template SS confidence 

















































   910.........20....... ..30.........40.. .......50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions