Job Description P0AFD1 Confidence 39.06% Date Thu Jan 5 11:25:57 GMT 2012 Rank 116 Aligned Residues 43 % Identity 16% Template c3kkcB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	S	I	E	A	L	K	I	V	Q	K	Q	R	G	W	V	P	D	G	A	I	H	A	I	A	D	V	L	G	I	P	A	S	D	V	E	G	V	A	T	F	Y	S	Q	I	F	R	Q
Query Conservation
Alig confidence																		.																			.	.	.	.	.	.
Template Conservation																		.																			.	.	.	.	.	.
Template Sequence		K	V	A	I	Y	N	A	F	I	S	L	L	Q	E	N	D	.	Y	S	K	I	T	V	Q	D	V	I	G	L	A	N	V	G	R	S	.	.	.	.	.	.	T	F	Y	S	H	Y	E	S	K
Template Known Secondary structure														T	S	S		.	G	G	G											T					.	.	.	.	.	.							S	S
Template Predicted Secondary structure																		.																			.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions