Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFD1
Confidence25.12%DateThu Jan 5 11:25:57 GMT 2012
Rank229Aligned Residues43
% Identity16%Templatec3geuC_
PDB info PDB header:cell adhesionChain: C: PDB Molecule:intercellular adhesion protein r; PDBTitle: crystal structure of icar from staphylococcus aureus, a member of the2 tetracycline repressor protein family
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80..
Predicted Secondary structure 









Query SS confidence 

















































Query Sequence  RAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQ
Query Conservation     

  
  

   
 

  
   

  
 
    
  
 


  
   
Alig confidence 


















.














......








Template Conservation 
  

 

  

   
   . 
   

  



  ......
 
 

 

Template Sequence  KDKIIDNAITLFSEKGYDG. TTLDDIAKSVNIKKA. . . . . . SLYYHFDSK
Template Known Secondary structure  TTTT.

TT

......TT
S
Template Predicted Secondary structure 



.




......


Template SS confidence 

















































   2.......10.........20 .........30..... ....40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions