Job Description P0AFD1 Confidence 55.60% Date Thu Jan 5 11:25:57 GMT 2012 Rank 30 Aligned Residues 47 % Identity 23% Template c3ccyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822 Resolution 2.01 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	D	P	R	A	A	S	I	E	A	L	K	I	V	Q	K	Q	R	G	W	V	P	D	G	A	I	H	A	I	A	D	V	L	G	I	P	A	S	D	V	E	G	V	A	T	F	Y	S	Q	I	F	R	Q
Query Conservation
Alig confidence																									.																.	.	.	.	.	.
Template Conservation																									.																.	.	.	.	.	.
Template Sequence		Y	E	N	I	R	D	T	I	I	E	R	A	A	A	X	F	A	R	Q	G	Y	S	E	.	T	S	I	G	D	I	A	R	A	C	E	C	S	K	S	.	.	.	.	.	.	R	L	Y	H	Y	F	D	S	K
Template Known Secondary structure			T	T																T		T	T	T	.	S									T	T			G	G	.	.	.	.	.	.	G	G	T	T	T		S
Template Predicted Secondary structure																									.																.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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