Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFD1
Confidence49.19%DateThu Jan 5 11:25:57 GMT 2012
Rank57Aligned Residues39
% Identity23%Templatec2wgbB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:tetr family transcriptional repressor lfrr; PDBTitle: crystal structure of the tetr-like transcriptional2 regulator lfrr from mycobacterium smegmatis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80..
Predicted Secondary structure 









Query SS confidence 















































Query Sequence  ASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQ
Query Conservation   

  
  

   
 

  
   

  
 
    
  
 


  
   
Alig confidence 















...













......








Template Conservation   

 

  

   
  ...

  

  



  ......


  
 

Template Sequence  AILDAAMLVLADHPTA. . . ALGDIAAAAGVGRS. . . . . . TVHRYYPER
Template Known Secondary structure 
TT
...
T

......
SS
Template Predicted Secondary structure 



...



......




Template SS confidence 















































   17..20.........30.. .......40...... ...50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions