Job Description P0AFD1 Confidence 33.49% Date Thu Jan 5 11:25:57 GMT 2012 Rank 145 Aligned Residues 33 % Identity 9% Template c2kt0A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:homeobox protein nanog; PDBTitle: solution structure of human stem cell transcription factor nanog2 homeodomain fragment Resolution UNK

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	A	L	K	I	V	Q	K	Q	R	G	W	V	P	D	G	A	I	H	A	I	A	D	V	L	G	I	P	A	S	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	V	L	N	D	R	F	Q	R	Q	K	Y	L	S	L	Q	Q	M	Q	E	L	S	N	I	L	N	L	S	Y	K	Q	V
Template Known Secondary structure												S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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