Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFD1
Confidence34.80%DateThu Jan 5 11:25:57 GMT 2012
Rank131Aligned Residues43
% Identity19%Templatec2d6yA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:putative tetr family regulatory protein; PDBTitle: crystal structure of transcriptional factor sco4008 from streptomyces2 coelicolor a3(2)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80..
Predicted Secondary structure 









Query SS confidence 

















































Query Sequence  RAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQ
Query Conservation     

  
  

   
 

  
   

  
 
    
  
 


  
   
Alig confidence 


















.














......








Template Conservation 
  

 

  
  
 
   . 

  

  



  ......  
  
 

Template Sequence  KARIFEAAVAEFARHGIAG. ARIDRIAAEARANKQ. . . . . . LIYAYYGNK
Template Known Secondary structure  TTTS.

T

......SS
Template Predicted Secondary structure 



.




......


Template SS confidence 

















































   10.........20........ .30.........40... ......50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions