Job Description P0AFD1 Confidence 42.84% Date Thu Jan 5 11:25:57 GMT 2012 Rank 88 Aligned Residues 60 % Identity 18% Template c1au7B_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:protein pit-1; PDBTitle: pit-1 mutant/dna complex Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.					.	.	.	.
Query SS confidence																						.	.	.					.	.	.	.
Query Sequence		E	A	F	E	L	S	A	A	E	R	E	A	I	E	H	E	M	H	H	Y	.	.	.	E	D	P	R	.	.	.	.	A	A	S	I	E	A	L	K	I	V	Q	K	Q	R	G	W	V	P	D	G	A	I	H	A	I	A	D	V	L	G	I	P	A	S	D	V
Query Conservation																						.	.	.					.	.	.	.
Alig confidence																						.	.	.					.	.	.	.
Template Conservation
Template Sequence		E	N	L	Q	L	S	F	K	N	A	C	K	L	K	A	I	L	S	K	W	L	E	E	A	K	R	R	T	T	I	S	I	A	A	K	D	A	L	E	R	H	F	G	E	H	S	K	P	S	S	Q	E	I	M	R	M	A	E	E	L	N	L	E	K	E	V	V
Template Known Secondary structure				T		S																											T	T	T	G	G	G	T					T	T		S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions