Return to main results Retrieve Phyre Job Id

Job DescriptionP23910
Confidence0.94%DateThu Jan 5 11:40:35 GMT 2012
Rank91Aligned Residues34
% Identity15%Templatec1qleB_
PDB info PDB header:oxidoreductase/immune systemChain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360.........370.........380.......
Predicted Secondary structure 









Query SS confidence 

































Query Sequence  YNYVALPAALLSFAAMSSLLLYGRYKRQQAADTP
Query Conservation                            
      
Alig confidence 

































Template Conservation       
   
 
 
   
     
 
        
Template Sequence  HFVLYIITAVTIFVCLLLLICIVRFNRRANPVPA
Template Known Secondary structure  SSTTT
SS

Template Predicted Secondary structure 








Template SS confidence 

































   36...40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions