 |
| Job Description | P23910 | | Confidence | 0.98% | Date | Thu Jan 5 11:40:35 GMT 2012 |
| Rank | 84 | Aligned Residues | 15 |
| % Identity | 20% | Template | c1qa4A_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:protein (hiv-1 nef anchor domain (2-57)); |
PDBTitle: hiv-1 nef anchor domain, nmr, 2 structures
|
| Resolution | UNK |
|
| | |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
R | Q | Q | A | A | D | T | P | V | L | A | K | P | L | G |
| Query Conservation | |
| | | | | | |
| | |
| |
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
|
|
| |
|
|
|
| Template Sequence | |
R | E | R | M | R | R | A | E | P | A | A | D | G | V | G |
| Template Known Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
| S |
|
|
| Template Predicted Secondary structure | |
 | | | | | |
|
|
|
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
