Job Description P15029 Confidence 100.00% Date Thu Jan 5 11:34:13 GMT 2012 Rank 1 Aligned Residues 309 % Identity 33% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	L	V	I	F	I	T	L	A	L	A	G	C	A	L	L	S	L	H	M	G	V	I	P	V	P	W	R	A	L	L	T	D	W	Q	A	G	H	E	H	Y	Y	V	L	M	E	Y	R	L	P	R	L	L	L	A	L	F	V	G	A	A	L	A	V	A	G	V	L	I	Q	G	I	V	R	N	P	L	A
Query Conservation
Alig confidence																																			.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	.	.	.	.	.	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	N	P	L	A
Template Known Secondary structure																							B	S	S	S	B			S	G	G	G	S	.	.	.	.	.	S	T	T	T	T	T					T																											T		T	T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.																														.
Query SS confidence																																																		.	.																														.
Query Sequence		S	P	D	I	L	G	V	N	H	A	A	S	L	A	S	V	G	A	L	L	L	M	P	S	L	P	V	M	V	L	P	L	L	A	F	A	G	G	M	A	G	L	I	L	L	K	M	L	.	.	A	K	T	H	Q	P	M	K	L	A	L	T	G	V	A	L	S	A	C	W	A	S	L	T	D	Y	L	M	L	.
Query Conservation																																																		.	.																														.
Alig confidence																																																		.	.																														.
Template Conservation
Template Sequence		E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W	A	I	Y	F
Template Known Secondary structure			T	T	T	T	T															T	S		T	T																												T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	Q	D	V	N	N	A	L	L	W	L	T	G	S	L	W	G	R	D	W	S	F	V	K	I	A	I	P	L	M	I	L	F	L	P	L	S	L	S	F	C	R	D	L	D	L	L	A	L	G	D	A	R	A	T	T	L	G	V	S	V	P	H	T	R	F	W	A	L	L	L	A	V	A	M	T	S	T
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	.	I	P	V	L	L	W	I	C	C	Q	S	R	P	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T	G	W	X	V	G	V
Template Known Secondary structure															T				T	T			G	G	G								.																											T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	A	C	G	P	I	S	F	I	G	L	V	V	P	H	M	M	R	S	I	T	G	G	R	H	R	R	L	L	P	V	S	A	L	T	G	A	L	L	L	V	V	A	D	L	L	A	R	I	I	H	P	P	L	E	L	P	V	G	V	L	T	A	I	I	G	A	P	W	F	V	W	L	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K
Template Known Secondary structure											S	S	S	S									T	T			S																										S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions