 |
Job Description | P15029 | Confidence | 3.30% | Date | Thu Jan 5 11:34:13 GMT 2012 |
Rank | 20 | Aligned Residues | 18 |
% Identity | 17% | Template | d1ku2a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma3 domain
|
Resolution | 2.90 |
|
  |   |
211 | . | . | . | . | . | . | . | |
|
. | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | R | A | T | T | L | G | . |
. |
V | S | V | P | H | T | R | F | W | A |
Query Conservation |   |
  |   |   |
|   |
|
|
| . | . |
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
Template Sequence |   |
E | E | I | A | E | A | M | G | P | G | W | D | A | K | R | V | E | E | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|