Job Description P15029 Confidence 47.26% Date Thu Jan 5 11:34:13 GMT 2012 Rank 3 Aligned Residues 166 % Identity 12% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	R	L	P	R	L	L	L	A	L	F	V	G	A	A	L	A	V	A	G	V	L	I	Q	G	I	V	R	N	P	L	A	S	P	D	I	L	G	V	N	H	A	A	S	L	A	S	V	G	A	L	L	L	M	P	S	L	P	V	M	V	L	P	L	L	A	F	A	G	G	M	A	G	L	I	L	L	K	M
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	.	.	.	.	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F
Template Known Secondary structure																														S		.	.	.	.																		T	T	T	T	T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																															.																															.	.
Query SS confidence																															.																															.	.
Query Sequence		L	A	K	T	H	Q	P	M	K	L	A	L	T	G	V	A	L	S	A	C	W	A	S	L	T	D	Y	L	M	.	L	S	R	P	Q	D	V	N	N	A	L	L	W	L	T	G	S	L	W	G	R	D	W	S	F	V	K	I	A	I	.	.	P	L	M	I	L	F	L	P	L	S	L	S	F	C	R	D	L	D
Query Conservation																															.																															.	.
Alig confidence						.	.																								.																															.	.
Template Conservation						.	.
Template Sequence		R	I	K	K	.	.	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V
Template Known Secondary structure					T	.	.	T				T	T																											S				G	G	G	T																																		T
Template Predicted Secondary structure						.	.
Template SS confidence
		290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	L	G	D	A	R	A	T	T	L	G	V	S	V
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		G	L	R	V	S	S	Q	E	E	Y	V	.	G	L	D	L
Template Known Secondary structure			S	B									.
Template Predicted Secondary structure													.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.		.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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