Job Description P19624 Confidence 99.95% Date Thu Jan 5 11:37:23 GMT 2012 Rank 10 Aligned Residues 282 % Identity 10% Template d2af4c1 SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Phosphotransacetylase Resolution 2.15

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																					.	.																															.
Query SS confidence																					.	.																															.
Query Sequence		T	Q	R	V	V	I	T	P	G	E	P	A	G	I	G	P	D	L	V	.	.	V	Q	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	.	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V	A	L
Query Conservation																					.	.																															.
Alig confidence													.	.	.	.					.	.																															.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	T	I	A	L	P	E	T	E	D	.	.	.	.	I	R	T	L	Q	A	A	A	K	I	L	E	R	G	I	A	D	I	V	L	V	G	N	E	A	D	I	K	A	L	A	G	D	L	D	L	S	K	A	K	I	V	D	P	K	T	Y	E	K	K	D	E	Y	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	S	.	.	.	.														T	S							S										S	S				T	T	S					T	T	S		T	T						.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100												.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		R	A	P	V	T	A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	.	.	.	.	.	.	.	.	.	.	.	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	.	.	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																			.	.														.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	A	F	Y	E	L	R	K	H	K	G	I	T	L	E	N	A	A	E	I	M	S	D	Y	V	Y	F	A	V	M	M	A	K	L	G	E	V	D	G	V	V	S	G	A	A	H	S	S	S	D	T	L	R	P	A	V	Q	.	.	.	.	.	.	.	I	V	K	T	A	K	G	A	A
Template Known Secondary structure		.	.	.	.	.	.	.								G	G	G	T										T	T	S											T	T	S		S						T	T	S		S										.	.	.	.	.	.	.		T		B	S	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Template SS confidence
									81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		K	V	V	M	M	L	A	T	E	E	L	R	V	A	L	A	T	T	H	L	P	L	R	D	I	A	D	A	I	.	.	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T
Query Conservation																															.	.
Alig confidence																															.	.																		.															.	.	.	.
Template Conservation																																																		.															.	.	.	.
Template Sequence		L	A	S	A	F	F	I	I	S	V	P	D	E	Y	G	S	D	G	T	F	L	F	A	D	S	G	M	V	E	M	P	S	V	E	D	V	A	N	I	A	V	I	S	A	K	T	F	E	.	L	L	V	Q	D	V	P	K	V	A	M	L	S	Y	.	.	.	.	S	T	K	G	S	A	K	S	K	L	T	E	A
Template Known Secondary structure																T	B	T	T						T	S	S	S		S	S																			.					S									S	.	.	.	.		S	T	T	S			S
Template Predicted Secondary structure																																																		.															.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.
		226	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.											.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure													.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	P	V	L	N	E	L	R	A	Q	.	.	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	.	.	.	.	.	.	.	.	.	.	L	D	N	A	D	A	V	L	A	M	Y	H	D	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T
Query Conservation													.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																			.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																																																																								.
Template Sequence		T	I	A	S	T	K	L	A	Q	E	L	A	P	D	I	A	I	D	G	E	L	Q	V	D	A	A	I	V	P	K	V	A	A	S	K	A	P	G	S	P	V	A	G	K	A	N	V	F	I	F	P	D	L	N	C	G	N	I	A	Y	K	I	A	Q	R	L	A	K	A	E	.	A	Y	G	P	I	T	Q	G	L
Template Known Secondary structure														T	T	S																					S	T	T		S	S	T	T	S							S	S														T	S				.								S	B
Template Predicted Secondary structure																																																																								.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K	M	I
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		A	K	P	.	.	.	.	.	I	N	D	L	S	R	G	C	S	D	E	D	I	V	G	A	V	A	I	T	C	V	Q	A
Template Known Secondary structure		S	S		.	.	.	.	.						T	T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		302	.	.						.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions