 |
Job Description | P19624 | Confidence | 30.93% | Date | Thu Jan 5 11:37:23 GMT 2012 |
Rank | 82 | Aligned Residues | 107 |
% Identity | 12% | Template | d1yioa2 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 2.20 |
|
 |
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
T | E | E | I | D | T | I | I | P | V | L | N | E | L | R | A | Q | G | M | K | L | N | G | P | L | P | A | D | T | L | F | Q | P | K | Y | L | D | N | A | D | A | V | L | A | M | Y | H | D | Q | G | L | P | V | L | K | Y | Q | G | F | G | R | G | V | N | I | T | L | G | L | P | F | I | R | T | S | V | D | H | . |
. |
Query Conservation |   |
  |
|
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |
|   |
|
|   |
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|
|
|
|   |
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   | . | . |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
D | D | D | M | S | V | R | E | G | L | R | N | L | L | R | S | A | G | F | E | V | E | T | F | D | C | A | S | T | F | L | E | H | R | R | P | E | Q | H | G | C | L | V | L | D | M | R | M | P | G | M | S | G | I | E | L | Q | E | Q | L | T | A | I | S | . |
. |
D | G | I | P | I | V | F | I | T | A | H | G | D | I |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  | S |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T | . | . |
|
|
|
|  |  |  |  |  | S |
| T | T | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
G | T | A | L | E | L | A | G | R | G | K | A | D | V | G | S | F | I | T | A | L | N | L | A | I | K | M | I | V | N | T | Q |
Query Conservation |   |
. | . | . | . | . | . | . | . |
|
|
|   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
| . |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
P | M | T | V | R | A | M | K | A | G | A | I | E | F | L | P | K | P | . |
F | E | E | Q | A | L | L | D | A | I | E | Q | G | L | Q | L | N | A | E | R | R |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|