Job Description P19624 Confidence 98.44% Date Thu Jan 5 11:37:23 GMT 2012 Rank 24 Aligned Residues 256 % Identity 17% Template d1xaca_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.10

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	I	T	P	G	E	P	A	G	I	G	P	D	L	V	V	Q	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V	A	L	R	A	P	V	T
Query Conservation
Alig confidence										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	L	P	G	D	.	.	G	I	G	P	E	V	T	E	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	R	A	L	D	E	A	E	G	L	G	L	A	Y	E	V	F	P	F	G	G	A	A	I	D	A	F	G	E	P	F	P	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	.	.	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.											T											T								S	S	S	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20															.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	K	V	V	M	M	L	A	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	R	K	G	V	E	E	.	.	A	E	A	V	L	L	G	S	V	G	G	P	K	W	D	Q	N	P	R	E	L	R	P	E	K	G	L	L	S	I	R	K	Q	L	D	L	F	A	N	L	R	P	V	K	V	F	E	S	L	S	D	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	S	S										G	G	G	T	T	S		S	T	T	S	T	T										T	T												G	G	G	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
																			56	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
									156	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		.	.	.	.	.	.	.	E	E	L	R	V	A	L	A	.	.	.	.	.	.	.	.	.	.	T	T	H	L	P	L	R	D	I	A	D	A	.	.	.	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G
Query Conservation		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.													.	.	.																					.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		P	L	K	K	E	Y	I	D	N	V	D	F	V	I	V	R	E	L	T	G	G	I	Y	F	G	E	P	R	G	M	S	E	A	E	A	W	N	T	E	R	Y	S	K	P	E	V	E	R	V	A	R	V	A	F	E	A	A	R	K	R	.	.	.	.	R	K	H	V	V	S	V	D	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S						T	T										S		G	G	G	T		S						S	S																										T	T	.	.	.	.	T								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.
		216	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.			.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure										.	.														.	.																				.	.									.	.					.	.	.	.
Query SS confidence										.	.														.	.																				.	.									.	.					.	.	.	.
Query Sequence		G	H	M	G	T	E	E	I	.	.	D	T	I	I	P	V	L	N	E	L	R	A	Q	.	.	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	.	.	D	N	A	D	A	V	L	A	.	.	M	Y	H	D	.	.	.	.	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N
Query Conservation										.	.														.	.																				.	.									.	.					.	.	.	.
Alig confidence		.	.							.	.														.	.						.														.	.									.	.					.	.	.	.
Template Conservation		.	.																													.
Template Sequence		.	.	K	A	N	V	L	E	V	G	E	F	W	R	K	T	V	E	E	V	G	R	G	Y	P	D	V	A	L	E	.	H	Q	Y	V	D	A	M	A	M	H	L	V	R	S	P	A	R	F	D	V	V	V	T	G	N	I	F	G	D	I	L	S	D	L	A	S	V	L	P	G	S	L	G	L	L	P	S	A	S
Template Known Secondary structure		.	.		T	T	T															G	G	G		T	T	S				.															G	G	G		S																	T	T	S	S		S		S
Template Predicted Secondary structure		.	.																													.
Template SS confidence
				185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	G	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		L	G	R	G	T	P	V	F	.	.	E	P	V	H	G	S	A	P	D	I	A	G	K	G	I	A	N	P	T	A	A	I	L	S	A	A	M	M	L	E
Template Known Secondary structure				S	S					.	.			S	S				G	G	G	T	T	S	S
Template Predicted Secondary structure										.	.
Template SS confidence
		262	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions