Job Description P19624 Confidence 98.73% Date Thu Jan 5 11:37:23 GMT 2012 Rank 16 Aligned Residues 250 % Identity 14% Template d1wpwa_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	I	T	P	G	E	P	A	G	I	G	P	D	L	V	V	Q	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V	A	L	R	A	P	V	T
Query Conservation
Alig confidence										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	A	L	I	Q	G	D	.	.	G	I	G	P	E	I	V	S	K	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	L	A	K	I	N	E	L	Y	S	L	P	I	E	Y	I	E	V	E	A	G	D	R	A	L	A	R	Y	G	E	A	L	P	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	.	.	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T											S							S	S	S	S	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.															.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	K	V	V	M	M	.	.	.	.	.	.	.	.	.	.	L	A	T
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																			.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	L	K	I	I	D	.	.	K	A	D	I	I	L	K	G	P	V	G	E	S	A	A	D	V	V	.	.	.	.	.	.	.	.	.	.	V	K	L	R	Q	I	Y	D	M	Y	A	N	I	R	P	A	K	S	I	P	G	I	D	T	K	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	T		S									T	T						.	.	.	.	.	.	.	.	.	.						T	T	T												T	T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			57	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.											.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		E	E	L	R	V	A	L	A	.	.	.	.	.	.	.	.	.	.	T	T	H	L	P	L	R	D	I	A	D	A	.	.	.	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E
Query Conservation										.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.													.	.	.																					.	.	.	.									.	.	.	.	.										.
Template Conservation																																																							.	.	.	.									.	.	.	.	.										.
Template Sequence		G	N	V	D	I	L	I	V	R	E	N	T	E	D	L	Y	K	G	F	E	H	I	V	S	D	G	V	A	V	G	M	K	I	I	T	R	F	A	S	E	R	I	A	K	V	G	L	N	F	A	L	R	R	.	.	.	.	R	K	K	V	T	C	V	H	.	.	.	.	.	K	A	N	V	M	R	I	T	D	.
Template Known Secondary structure		S											S	S	B	T	T	T								T	T							B																			T	T	.	.	.	.	T	S							.	.	.	.	.		T	T	T		T	T			.
Template Predicted Secondary structure																																																							.	.	.	.									.	.	.	.	.										.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.			.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																			.									.	.					.	.	.	.
Query SS confidence																																			.									.	.					.	.	.	.
Query Sequence		I	D	T	I	I	P	V	L	N	E	L	R	A	Q	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	.	D	N	A	D	A	V	L	A	.	.	M	Y	H	D	.	.	.	.	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V
Query Conservation																																			.									.	.					.	.	.	.
Alig confidence		.																																	.									.	.					.	.	.	.																		.	.
Template Conservation		.																																																																					.	.
Template Sequence		.	G	L	F	A	E	A	C	R	S	V	L	K	G	K	V	E	Y	S	E	M	Y	V	D	A	A	A	A	N	L	V	R	N	P	Q	M	F	D	V	I	V	T	E	N	V	Y	G	D	I	L	S	D	E	A	S	Q	I	A	G	S	L	G	I	A	P	S	A	N	I	.	.	G	D	K	K	A	L	F	E	P
Template Known Secondary structure		.												T	T	T	S																		G	G	G		S																					T		G	G	G							.	.		S	S
Template Predicted Secondary structure		.																																																																					.	.
Template SS confidence
			178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	G	A	A	F	D	I	A	G	K	N	I	G	N	P	T	A	F	L	L	S	V	S	M	M	Y	E
Template Known Secondary structure		S	S				T	T	T	T	T	S	S				T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions